(11 nodes) mRNA editing complex, and N6-methyladenosine-containing RNA binding network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11220	R3H domain-containing protein. (269 aa)
	T265_15230	Uncharacterized protein. (556 aa)
	T265_10724	Reverse transcriptase domain-containing protein. (917 aa)
	T265_06150	Uncharacterized protein; Belongs to the MT-A70-like family. (725 aa)
	T265_05078	YTH domain-containing protein. (804 aa)
	T265_04383	YTH domain-containing protein. (918 aa)
	T265_11801	Uncharacterized protein; Belongs to the MT-A70-like family. (624 aa)
	T265_00984	VIR_N domain-containing protein. (304 aa)
	T265_00985	Uncharacterized protein. (2009 aa)
	T265_00168	Uncharacterized protein. (801 aa)
	T265_07570	Uncharacterized protein. (411 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00168	T265_00984	A0A075A4M2	A0A075A148	Uncharacterized protein.	VIR_N domain-containing protein.	0.553
T265_00168	T265_00985	A0A075A4M2	A0A075A475	Uncharacterized protein.	Uncharacterized protein.	0.553
T265_00168	T265_04383	A0A075A4M2	A0A074ZN60	Uncharacterized protein.	YTH domain-containing protein.	0.514
T265_00168	T265_05078	A0A075A4M2	A0A074ZL03	Uncharacterized protein.	YTH domain-containing protein.	0.457
T265_00168	T265_06150	A0A075A4M2	A0A074ZHF2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.668
T265_00168	T265_07570	A0A075A4M2	A0A075AB53	Uncharacterized protein.	Uncharacterized protein.	0.622
T265_00168	T265_10724	A0A075A4M2	A0A074Z5K1	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.540
T265_00168	T265_11801	A0A075A4M2	A0A074ZW53	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.653
T265_00168	T265_15230	A0A075A4M2	A0A074Z1L8	Uncharacterized protein.	Uncharacterized protein.	0.622
T265_00984	T265_00168	A0A075A148	A0A075A4M2	VIR_N domain-containing protein.	Uncharacterized protein.	0.553
T265_00984	T265_00985	A0A075A148	A0A075A475	VIR_N domain-containing protein.	Uncharacterized protein.	0.425
T265_00984	T265_04383	A0A075A148	A0A074ZN60	VIR_N domain-containing protein.	YTH domain-containing protein.	0.457
T265_00984	T265_06150	A0A075A148	A0A074ZHF2	VIR_N domain-containing protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.602
T265_00984	T265_07570	A0A075A148	A0A075AB53	VIR_N domain-containing protein.	Uncharacterized protein.	0.744
T265_00984	T265_10724	A0A075A148	A0A074Z5K1	VIR_N domain-containing protein.	Reverse transcriptase domain-containing protein.	0.803
T265_00984	T265_11220	A0A075A148	A0A074YZU2	VIR_N domain-containing protein.	R3H domain-containing protein.	0.541
T265_00984	T265_11801	A0A075A148	A0A074ZW53	VIR_N domain-containing protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.646
T265_00984	T265_15230	A0A075A148	A0A074Z1L8	VIR_N domain-containing protein.	Uncharacterized protein.	0.744
T265_00985	T265_00168	A0A075A475	A0A075A4M2	Uncharacterized protein.	Uncharacterized protein.	0.553
T265_00985	T265_00984	A0A075A475	A0A075A148	Uncharacterized protein.	VIR_N domain-containing protein.	0.425