5 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15805	PUL domain-containing protein. (285 aa)
	T265_10827	Uncharacterized protein. (589 aa)
	T265_09935	Uncharacterized protein; Belongs to the AAA ATPase family. (827 aa)
	T265_03977	Uncharacterized protein. (730 aa)
	T265_03542	U-box domain-containing protein. (1157 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_03542	T265_03977	A0A075A2Z7	A0A074ZPQ9	U-box domain-containing protein.	Uncharacterized protein.	0.911
T265_03542	T265_09935	A0A075A2Z7	A0A074Z8E9	U-box domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.922
T265_03542	T265_10827	A0A075A2Z7	A0A074Z593	U-box domain-containing protein.	Uncharacterized protein.	0.862
T265_03542	T265_15805	A0A075A2Z7	A0A074YVX1	U-box domain-containing protein.	PUL domain-containing protein.	0.634
T265_03977	T265_03542	A0A074ZPQ9	A0A075A2Z7	Uncharacterized protein.	U-box domain-containing protein.	0.911
T265_03977	T265_09935	A0A074ZPQ9	A0A074Z8E9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.990
T265_03977	T265_10827	A0A074ZPQ9	A0A074Z593	Uncharacterized protein.	Uncharacterized protein.	0.980
T265_03977	T265_15805	A0A074ZPQ9	A0A074YVX1	Uncharacterized protein.	PUL domain-containing protein.	0.977
T265_09935	T265_03542	A0A074Z8E9	A0A075A2Z7	Uncharacterized protein; Belongs to the AAA ATPase family.	U-box domain-containing protein.	0.922
T265_09935	T265_03977	A0A074Z8E9	A0A074ZPQ9	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.990
T265_09935	T265_10827	A0A074Z8E9	A0A074Z593	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.999
T265_09935	T265_15805	A0A074Z8E9	A0A074YVX1	Uncharacterized protein; Belongs to the AAA ATPase family.	PUL domain-containing protein.	0.959
T265_10827	T265_03542	A0A074Z593	A0A075A2Z7	Uncharacterized protein.	U-box domain-containing protein.	0.862
T265_10827	T265_03977	A0A074Z593	A0A074ZPQ9	Uncharacterized protein.	Uncharacterized protein.	0.980
T265_10827	T265_09935	A0A074Z593	A0A074Z8E9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.999
T265_10827	T265_15805	A0A074Z593	A0A074YVX1	Uncharacterized protein.	PUL domain-containing protein.	0.977
T265_15805	T265_03542	A0A074YVX1	A0A075A2Z7	PUL domain-containing protein.	U-box domain-containing protein.	0.634
T265_15805	T265_03977	A0A074YVX1	A0A074ZPQ9	PUL domain-containing protein.	Uncharacterized protein.	0.977
T265_15805	T265_09935	A0A074YVX1	A0A074Z8E9	PUL domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.959
T265_15805	T265_10827	A0A074YVX1	A0A074Z593	PUL domain-containing protein.	Uncharacterized protein.	0.977