(5 nodes) DNA recombinase mediator complex, and DNA recombinase assembly network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_14187	Uncharacterized protein. (831 aa)
	T265_00147	Uncharacterized protein. (235 aa)
	T265_01035	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (365 aa)
	T265_00453	Uncharacterized protein. (1934 aa)
	T265_12513	RECA_2 domain-containing protein. (382 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00147	T265_00453	A0A075A3Q3	A0A075A637	Uncharacterized protein.	Uncharacterized protein.	0.826
T265_00147	T265_01035	A0A075A3Q3	A0A075A3T3	Uncharacterized protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.898
T265_00147	T265_12513	A0A075A3Q3	A0A075AJS0	Uncharacterized protein.	RECA_2 domain-containing protein.	0.898
T265_00147	T265_14187	A0A075A3Q3	A0A074ZIH0	Uncharacterized protein.	Uncharacterized protein.	0.948
T265_00453	T265_00147	A0A075A637	A0A075A3Q3	Uncharacterized protein.	Uncharacterized protein.	0.826
T265_00453	T265_01035	A0A075A637	A0A075A3T3	Uncharacterized protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.999
T265_00453	T265_12513	A0A075A637	A0A075AJS0	Uncharacterized protein.	RECA_2 domain-containing protein.	0.973
T265_00453	T265_14187	A0A075A637	A0A074ZIH0	Uncharacterized protein.	Uncharacterized protein.	0.962
T265_01035	T265_00147	A0A075A3T3	A0A075A3Q3	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.898
T265_01035	T265_00453	A0A075A3T3	A0A075A637	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.999
T265_01035	T265_12513	A0A075A3T3	A0A075AJS0	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	RECA_2 domain-containing protein.	0.849
T265_01035	T265_14187	A0A075A3T3	A0A074ZIH0	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.981
T265_12513	T265_00147	A0A075AJS0	A0A075A3Q3	RECA_2 domain-containing protein.	Uncharacterized protein.	0.898
T265_12513	T265_00453	A0A075AJS0	A0A075A637	RECA_2 domain-containing protein.	Uncharacterized protein.	0.973
T265_12513	T265_01035	A0A075AJS0	A0A075A3T3	RECA_2 domain-containing protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.849
T265_12513	T265_14187	A0A075AJS0	A0A074ZIH0	RECA_2 domain-containing protein.	Uncharacterized protein.	0.982
T265_14187	T265_00147	A0A074ZIH0	A0A075A3Q3	Uncharacterized protein.	Uncharacterized protein.	0.948
T265_14187	T265_00453	A0A074ZIH0	A0A075A637	Uncharacterized protein.	Uncharacterized protein.	0.962
T265_14187	T265_01035	A0A074ZIH0	A0A075A3T3	Uncharacterized protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.981
T265_14187	T265_12513	A0A074ZIH0	A0A075AJS0	Uncharacterized protein.	RECA_2 domain-containing protein.	0.982