(10 nodes) HDACs deacetylate histones network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11517	MBD domain-containing protein. (355 aa)
	T265_15292	HMG box domain-containing protein. (263 aa)
	T265_16283	ELM2 domain-containing protein. (85 aa)
	T265_09123	Uncharacterized protein. (923 aa)
	T265_08005	Uncharacterized protein. (1881 aa)
	T265_06719	GATA-type domain-containing protein. (437 aa)
	T265_06604	Uncharacterized protein. (2022 aa)
	T265_04606	Uncharacterized protein. (165 aa)
	T265_03747	Uncharacterized protein. (770 aa)
	T265_01693	Uncharacterized protein. (1151 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01693	T265_03747	A0A074ZYW8	A0A074ZV70	Uncharacterized protein.	Uncharacterized protein.	0.671
T265_01693	T265_04606	A0A074ZYW8	A0A074ZME0	Uncharacterized protein.	Uncharacterized protein.	0.697
T265_01693	T265_06604	A0A074ZYW8	A0A074ZFV1	Uncharacterized protein.	Uncharacterized protein.	0.866
T265_01693	T265_06719	A0A074ZYW8	A0A074ZFE6	Uncharacterized protein.	GATA-type domain-containing protein.	0.718
T265_01693	T265_08005	A0A074ZYW8	A0A074ZFB1	Uncharacterized protein.	Uncharacterized protein.	0.629
T265_01693	T265_09123	A0A074ZYW8	A0A074ZB95	Uncharacterized protein.	Uncharacterized protein.	0.671
T265_01693	T265_11517	A0A074ZYW8	A0A074YYR1	Uncharacterized protein.	MBD domain-containing protein.	0.708
T265_01693	T265_15292	A0A074ZYW8	A0A074Z0L1	Uncharacterized protein.	HMG box domain-containing protein.	0.820
T265_01693	T265_16283	A0A074ZYW8	A0A074Z4A0	Uncharacterized protein.	ELM2 domain-containing protein.	0.855
T265_03747	T265_01693	A0A074ZV70	A0A074ZYW8	Uncharacterized protein.	Uncharacterized protein.	0.671
T265_03747	T265_04606	A0A074ZV70	A0A074ZME0	Uncharacterized protein.	Uncharacterized protein.	0.817
T265_03747	T265_06604	A0A074ZV70	A0A074ZFV1	Uncharacterized protein.	Uncharacterized protein.	0.898
T265_03747	T265_06719	A0A074ZV70	A0A074ZFE6	Uncharacterized protein.	GATA-type domain-containing protein.	0.818
T265_03747	T265_08005	A0A074ZV70	A0A074ZFB1	Uncharacterized protein.	Uncharacterized protein.	0.781
T265_03747	T265_11517	A0A074ZV70	A0A074YYR1	Uncharacterized protein.	MBD domain-containing protein.	0.934
T265_04606	T265_01693	A0A074ZME0	A0A074ZYW8	Uncharacterized protein.	Uncharacterized protein.	0.697
T265_04606	T265_03747	A0A074ZME0	A0A074ZV70	Uncharacterized protein.	Uncharacterized protein.	0.817
T265_04606	T265_06604	A0A074ZME0	A0A074ZFV1	Uncharacterized protein.	Uncharacterized protein.	0.868
T265_04606	T265_06719	A0A074ZME0	A0A074ZFE6	Uncharacterized protein.	GATA-type domain-containing protein.	0.802
T265_04606	T265_08005	A0A074ZME0	A0A074ZFB1	Uncharacterized protein.	Uncharacterized protein.	0.769