(14 nodes) Mixed, incl. GPN-loop GTPase, and Box C/D snoRNP assembly network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10686	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (340 aa)
	T265_10408	NUFIP1 domain-containing protein. (384 aa)
	T265_10136	HIT zinc finger. (136 aa)
	T265_09201	Iwr1 domain-containing protein. (256 aa)
	T265_11444	Uncharacterized protein. (287 aa)
	T265_14908	Uncharacterized protein. (1739 aa)
	T265_08212	Uncharacterized protein. (459 aa)
	T265_14155	SWIM-type domain-containing protein. (1379 aa)
	T265_14088	RTP1_C1 domain-containing protein. (2334 aa)
	T265_04692	PIH1_CS domain-containing protein. (433 aa)
	T265_14969	TPR_REGION domain-containing protein. (478 aa)
	T265_00059	WD_REPEATS_REGION domain-containing protein. (423 aa)
	T265_01454	LRRcap domain-containing protein. (627 aa)
	T265_01252	FtsJ domain-containing protein. (818 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00059	T265_04692	A0A075A4C4	A0A074ZM54	WD_REPEATS_REGION domain-containing protein.	PIH1_CS domain-containing protein.	0.543
T265_00059	T265_11444	A0A075A4C4	A0A074Z9F4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.848
T265_00059	T265_14969	A0A075A4C4	A0A075A3I5	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.892
T265_01252	T265_04692	A0A075AJ50	A0A074ZM54	FtsJ domain-containing protein.	PIH1_CS domain-containing protein.	0.422
T265_01252	T265_08212	A0A075AJ50	A0A074ZEF4	FtsJ domain-containing protein.	Uncharacterized protein.	0.935
T265_01252	T265_09201	A0A075AJ50	A0A074Z6G5	FtsJ domain-containing protein.	Iwr1 domain-containing protein.	0.537
T265_01252	T265_10686	A0A075AJ50	A0A074Z1A9	FtsJ domain-containing protein.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.683
T265_01252	T265_11444	A0A075AJ50	A0A074Z9F4	FtsJ domain-containing protein.	Uncharacterized protein.	0.651
T265_01252	T265_14908	A0A075AJ50	A0A074Z9J7	FtsJ domain-containing protein.	Uncharacterized protein.	0.631
T265_01454	T265_04692	A0A075AA00	A0A074ZM54	LRRcap domain-containing protein.	PIH1_CS domain-containing protein.	0.532
T265_01454	T265_11444	A0A075AA00	A0A074Z9F4	LRRcap domain-containing protein.	Uncharacterized protein.	0.537
T265_04692	T265_00059	A0A074ZM54	A0A075A4C4	PIH1_CS domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.543
T265_04692	T265_01252	A0A074ZM54	A0A075AJ50	PIH1_CS domain-containing protein.	FtsJ domain-containing protein.	0.422
T265_04692	T265_01454	A0A074ZM54	A0A075AA00	PIH1_CS domain-containing protein.	LRRcap domain-containing protein.	0.532
T265_04692	T265_08212	A0A074ZM54	A0A074ZEF4	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.412
T265_04692	T265_11444	A0A074ZM54	A0A074Z9F4	PIH1_CS domain-containing protein.	Uncharacterized protein.	0.514
T265_04692	T265_14155	A0A074ZM54	A0A074ZEQ3	PIH1_CS domain-containing protein.	SWIM-type domain-containing protein.	0.529
T265_04692	T265_14969	A0A074ZM54	A0A075A3I5	PIH1_CS domain-containing protein.	TPR_REGION domain-containing protein.	0.812
T265_08212	T265_01252	A0A074ZEF4	A0A075AJ50	Uncharacterized protein.	FtsJ domain-containing protein.	0.935
T265_08212	T265_04692	A0A074ZEF4	A0A074ZM54	Uncharacterized protein.	PIH1_CS domain-containing protein.	0.412