STRINGSTRING
T265_16149 T265_16149 T265_11253 T265_11253 T265_12180 T265_12180 T265_09517 T265_09517 T265_09251 T265_09251 T265_14746 T265_14746 T265_07772 T265_07772 T265_11159 T265_11159 T265_01915 T265_01915 T265_00226 T265_00226
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T265_16149H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (130 aa)
T265_11253Uncharacterized protein. (313 aa)
T265_12180Uncharacterized protein. (339 aa)
T265_09517Uncharacterized protein. (1389 aa)
T265_09251Uncharacterized protein. (64 aa)
T265_14746SRP40_C domain-containing protein. (372 aa)
T265_07772PUA domain-containing protein. (405 aa)
T265_11159H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (336 aa)
T265_01915Uncharacterized protein. (709 aa)
T265_00226Uncharacterized protein. (634 aa)
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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