(14 nodes) Mixed, incl. Exon-exon junction complex, and ISG15 antiviral mechanism network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15451	Smg4_UPF3 domain-containing protein. (650 aa)
	T265_11153	Mago nashi protein. (102 aa)
	T265_09918	Mago-bind domain-containing protein. (328 aa)
	T265_10864	Uncharacterized protein; Belongs to the DEAD box helicase family. (469 aa)
	T265_11132	PWI domain-containing protein. (247 aa)
	T265_06548	Sin3 associated polypeptide p18. (234 aa)
	T265_09400	RRM domain-containing protein. (206 aa)
	T265_04671	Uncharacterized protein. (810 aa)
	T265_02354	Uncharacterized protein. (1461 aa)
	T265_03246	Uncharacterized protein. (436 aa)
	T265_04125	Uncharacterized protein. (1476 aa)
	T265_01304	Uncharacterized protein; Belongs to the DEAD box helicase family. (664 aa)
	T265_01122	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (177 aa)
	T265_00997	Btz domain-containing protein. (780 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00997	T265_01122	A0A075ABA5	A0A075AAL2	Btz domain-containing protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
T265_00997	T265_01304	A0A075ABA5	A0A075AA29	Btz domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.999
T265_00997	T265_02354	A0A075ABA5	A0A074ZWD1	Btz domain-containing protein.	Uncharacterized protein.	0.873
T265_00997	T265_03246	A0A075ABA5	A0A074ZWM2	Btz domain-containing protein.	Uncharacterized protein.	0.763
T265_00997	T265_04125	A0A075ABA5	A0A075A119	Btz domain-containing protein.	Uncharacterized protein.	0.974
T265_00997	T265_04671	A0A075ABA5	A0A074ZRT0	Btz domain-containing protein.	Uncharacterized protein.	0.688
T265_00997	T265_06548	A0A075ABA5	A0A074ZFS7	Btz domain-containing protein.	Sin3 associated polypeptide p18.	0.732
T265_00997	T265_09400	A0A075ABA5	A0A074ZH23	Btz domain-containing protein.	RRM domain-containing protein.	0.781
T265_00997	T265_10864	A0A075ABA5	A0A074Z512	Btz domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.968
T265_00997	T265_11132	A0A075ABA5	A0A074ZAN6	Btz domain-containing protein.	PWI domain-containing protein.	0.692
T265_00997	T265_11153	A0A075ABA5	A0A074Z416	Btz domain-containing protein.	Mago nashi protein.	0.988
T265_00997	T265_15451	A0A075ABA5	A0A074Z2S3	Btz domain-containing protein.	Smg4_UPF3 domain-containing protein.	0.969
T265_01122	T265_00997	A0A075AAL2	A0A075ABA5	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Btz domain-containing protein.	0.999
T265_01122	T265_01304	A0A075AAL2	A0A075AA29	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.999
T265_01122	T265_02354	A0A075AAL2	A0A074ZWD1	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Uncharacterized protein.	0.988
T265_01122	T265_03246	A0A075AAL2	A0A074ZWM2	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Uncharacterized protein.	0.813
T265_01122	T265_04125	A0A075AAL2	A0A075A119	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Uncharacterized protein.	0.973
T265_01122	T265_04671	A0A075AAL2	A0A074ZRT0	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Uncharacterized protein.	0.793
T265_01122	T265_06548	A0A075AAL2	A0A074ZFS7	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	Sin3 associated polypeptide p18.	0.876
T265_01122	T265_09400	A0A075AAL2	A0A074ZH23	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	RRM domain-containing protein.	0.961