(11 nodes) Mixed, incl. RNA recognition motif domain, eukaryote, and CID domain network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11398	Uncharacterized protein. (512 aa)
	T265_10608	DUF2052 domain-containing protein. (412 aa)
	T265_07497	Uncharacterized protein. (620 aa)
	T265_14589	CID domain-containing protein. (634 aa)
	T265_14590	RRM domain-containing protein. (277 aa)
	T265_05335	Uncharacterized protein. (1199 aa)
	T265_02973	Uncharacterized protein. (445 aa)
	T265_03201	Tudor domain-containing protein. (213 aa)
	T265_01921	Uncharacterized protein. (1092 aa)
	T265_12872	Integrase catalytic domain-containing protein. (1816 aa)
	T265_06310	Uncharacterized protein. (1114 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01921	T265_02973	A0A075A160	A0A074ZT79	Uncharacterized protein.	Uncharacterized protein.	0.515
T265_01921	T265_05335	A0A075A160	A0A074ZKQ0	Uncharacterized protein.	Uncharacterized protein.	0.432
T265_01921	T265_06310	A0A075A160	A0A075AE20	Uncharacterized protein.	Uncharacterized protein.	0.423
T265_01921	T265_14589	A0A075A160	A0A074ZDC1	Uncharacterized protein.	CID domain-containing protein.	0.414
T265_01921	T265_14590	A0A075A160	A0A074ZJZ6	Uncharacterized protein.	RRM domain-containing protein.	0.414
T265_02973	T265_01921	A0A074ZT79	A0A075A160	Uncharacterized protein.	Uncharacterized protein.	0.515
T265_02973	T265_03201	A0A074ZT79	A0A074ZTB8	Uncharacterized protein.	Tudor domain-containing protein.	0.878
T265_02973	T265_05335	A0A074ZT79	A0A074ZKQ0	Uncharacterized protein.	Uncharacterized protein.	0.965
T265_02973	T265_07497	A0A074ZT79	A0A074ZCN4	Uncharacterized protein.	Uncharacterized protein.	0.647
T265_02973	T265_11398	A0A074ZT79	A0A074YZ52	Uncharacterized protein.	Uncharacterized protein.	0.647
T265_02973	T265_14589	A0A074ZT79	A0A074ZDC1	Uncharacterized protein.	CID domain-containing protein.	0.923
T265_02973	T265_14590	A0A074ZT79	A0A074ZJZ6	Uncharacterized protein.	RRM domain-containing protein.	0.923
T265_03201	T265_02973	A0A074ZTB8	A0A074ZT79	Tudor domain-containing protein.	Uncharacterized protein.	0.878
T265_03201	T265_05335	A0A074ZTB8	A0A074ZKQ0	Tudor domain-containing protein.	Uncharacterized protein.	0.714
T265_03201	T265_07497	A0A074ZTB8	A0A074ZCN4	Tudor domain-containing protein.	Uncharacterized protein.	0.672
T265_03201	T265_11398	A0A074ZTB8	A0A074YZ52	Tudor domain-containing protein.	Uncharacterized protein.	0.672
T265_03201	T265_14589	A0A074ZTB8	A0A074ZDC1	Tudor domain-containing protein.	CID domain-containing protein.	0.666
T265_03201	T265_14590	A0A074ZTB8	A0A074ZJZ6	Tudor domain-containing protein.	RRM domain-containing protein.	0.666
T265_05335	T265_01921	A0A074ZKQ0	A0A075A160	Uncharacterized protein.	Uncharacterized protein.	0.432
T265_05335	T265_02973	A0A074ZKQ0	A0A074ZT79	Uncharacterized protein.	Uncharacterized protein.	0.965