(37 nodes) Mixed, incl. Fork head domain conserved site 2, and Zinc finger C2H2 superfamily network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11719	Uncharacterized protein. (735 aa)
	T265_11225	RING-type domain-containing protein. (675 aa)
	T265_15912	Uncharacterized protein. (54 aa)
	T265_10714	XRN2-binding (XTBD) domain-containing protein. (229 aa)
	T265_15114	Uncharacterized protein. (714 aa)
	T265_12148	Uncharacterized protein. (127 aa)
	T265_09196	Uncharacterized protein. (1137 aa)
	T265_08259	Uncharacterized protein. (68 aa)
	T265_07980	Uncharacterized protein. (426 aa)
	T265_07958	ASXH domain-containing protein. (1348 aa)
	T265_10889	Fork-head domain-containing protein. (1852 aa)
	T265_14123	Uncharacterized protein. (529 aa)
	T265_09545	Uncharacterized protein. (619 aa)
	T265_06080	Tyrosinase_Cu-bd domain-containing protein. (218 aa)
	T265_05500	Uncharacterized protein. (1072 aa)
	T265_14052	Uncharacterized protein. (398 aa)
	T265_06415	Fork-head domain-containing protein. (988 aa)
	T265_13685	Uncharacterized protein. (483 aa)
	T265_07413	Uncharacterized protein. (372 aa)
	T265_05336	BHLH domain-containing protein. (578 aa)
	T265_13332	Uncharacterized protein. (220 aa)
	T265_03792	Uncharacterized protein. (177 aa)
	T265_16199	Uncharacterized protein. (110 aa)
	T265_13483	IRF tryptophan pentad repeat domain-containing protein. (657 aa)
	T265_13454	Uncharacterized protein. (519 aa)
	T265_15929	Uncharacterized protein. (72 aa)
	T265_02159	Uncharacterized protein. (1798 aa)
	T265_02204	Uncharacterized protein. (628 aa)
	T265_10764	Uncharacterized protein. (658 aa)
	T265_01242	Integrase catalytic domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (749 aa)
	T265_00122	RING-type domain-containing protein. (967 aa)
	T265_12919	Uncharacterized protein. (238 aa)
	T265_08574	Homeobox domain-containing protein. (832 aa)
	T265_08257	Uncharacterized protein. (715 aa)
	T265_14440	Uncharacterized protein. (565 aa)
	T265_04001	Uncharacterized protein. (662 aa)
	T265_13350	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (215 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01242	T265_05336	A0A075A3C9	A0A074ZP73	Integrase catalytic domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	BHLH domain-containing protein.	0.535
T265_03792	T265_07958	A0A074ZR46	A0A074ZB52	Uncharacterized protein.	ASXH domain-containing protein.	0.535
T265_03792	T265_10764	A0A074ZR46	A0A075A016	Uncharacterized protein.	Uncharacterized protein.	0.633
T265_03792	T265_13332	A0A074ZR46	A0A074ZQ94	Uncharacterized protein.	Uncharacterized protein.	0.411
T265_05336	T265_01242	A0A074ZP73	A0A075A3C9	BHLH domain-containing protein.	Integrase catalytic domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.535
T265_05336	T265_13350	A0A074ZP73	A0A075AHB0	BHLH domain-containing protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.584
T265_06415	T265_10764	A0A074ZKK2	A0A075A016	Fork-head domain-containing protein.	Uncharacterized protein.	0.420
T265_07958	T265_03792	A0A074ZB52	A0A074ZR46	ASXH domain-containing protein.	Uncharacterized protein.	0.535
T265_07958	T265_10764	A0A074ZB52	A0A075A016	ASXH domain-containing protein.	Uncharacterized protein.	0.919
T265_07958	T265_13332	A0A074ZB52	A0A074ZQ94	ASXH domain-containing protein.	Uncharacterized protein.	0.535
T265_07958	T265_14440	A0A074ZB52	A0A075A9Y4	ASXH domain-containing protein.	Uncharacterized protein.	0.681
T265_08257	T265_08574	A0A075A8W9	A0A075A7Z0	Uncharacterized protein.	Homeobox domain-containing protein.	0.433
T265_08259	T265_10764	A0A074Z9Q0	A0A075A016	Uncharacterized protein.	Uncharacterized protein.	0.420
T265_08574	T265_08257	A0A075A7Z0	A0A075A8W9	Homeobox domain-containing protein.	Uncharacterized protein.	0.433
T265_08574	T265_13483	A0A075A7Z0	A0A074ZSZ6	Homeobox domain-containing protein.	IRF tryptophan pentad repeat domain-containing protein.	0.433
T265_10764	T265_03792	A0A075A016	A0A074ZR46	Uncharacterized protein.	Uncharacterized protein.	0.633
T265_10764	T265_06415	A0A075A016	A0A074ZKK2	Uncharacterized protein.	Fork-head domain-containing protein.	0.420
T265_10764	T265_07958	A0A075A016	A0A074ZB52	Uncharacterized protein.	ASXH domain-containing protein.	0.919
T265_10764	T265_08259	A0A075A016	A0A074Z9Q0	Uncharacterized protein.	Uncharacterized protein.	0.420
T265_10764	T265_10889	A0A075A016	A0A074ZBK7	Uncharacterized protein.	Fork-head domain-containing protein.	0.420