122 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_04289	Uncharacterized protein. (416 aa)
	T265_06245	RNA polymerase K / subunit. (136 aa)
	T265_04366	TAFH domain-containing protein. (725 aa)
	T265_03178	Uncharacterized protein. (416 aa)
	T265_06400	Homeobox domain-containing protein. (346 aa)
	T265_03216	Uncharacterized protein. (744 aa)
	T265_03379	Uncharacterized protein. (1356 aa)
	T265_13585	Uncharacterized protein. (496 aa)
	T265_13274	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (601 aa)
	T265_13305	CBFD_NFYB_HMF domain-containing protein. (273 aa)
	T265_05012	Uncharacterized protein. (551 aa)
	T265_04996	Integrase catalytic domain-containing protein. (972 aa)
	T265_13707	Transcription factor TFIID. (265 aa)
	T265_04351	Uncharacterized protein. (642 aa)
	T265_04591	Zinc finger, C2H2 type. (373 aa)
	T265_14327	WD_REPEATS_REGION domain-containing protein. (318 aa)
	T265_04737	Uncharacterized protein. (560 aa)
	T265_04576	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1395 aa)
	T265_14381	Uncharacterized protein. (1442 aa)
	T265_07919	Uncharacterized protein. (584 aa)
	T265_13978	Uncharacterized protein. (2777 aa)
	T265_05533	Uncharacterized protein. (766 aa)
	T265_09179	RPOL4c domain-containing protein. (260 aa)
	T265_07450	Zinc finger, C2H2 type. (518 aa)
	T265_06290	Uncharacterized protein. (763 aa)
	T265_09429	Uncharacterized protein. (186 aa)
	T265_06498	Uncharacterized protein. (825 aa)
	T265_06414	Uncharacterized protein. (377 aa)
	T265_09660	Uncharacterized protein. (112 aa)
	T265_07925	GCM domain-containing protein. (1053 aa)
	T265_06756	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (547 aa)
	T265_14113	Reverse transcriptase domain-containing protein. (1401 aa)
	T265_06784	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1571 aa)
	T265_10182	RPOLD domain-containing protein. (483 aa)
	T265_07346	Uncharacterized protein. (936 aa)
	T265_07434	Uncharacterized protein. (145 aa)
	T265_07453	Uncharacterized protein. (253 aa)
	T265_07586	Uncharacterized protein. (456 aa)
	T265_10695	TFIIB-type domain-containing protein. (700 aa)
	T265_14759	Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1182 aa)
	T265_14828	HTH TFE/IIEalpha-type domain-containing protein. (431 aa)
	T265_09412	Uncharacterized protein. (67 aa)
	T265_08332	Uncharacterized protein. (813 aa)
	T265_08330	Uncharacterized protein. (440 aa)
	T265_14908	Uncharacterized protein. (1739 aa)
	T265_14926	RHD domain-containing protein. (1381 aa)
	T265_11444	Uncharacterized protein. (287 aa)
	T265_09833	WD_REPEATS_REGION domain-containing protein. (1255 aa)
	T265_14634	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (338 aa)
	T265_08694	Plus3 domain-containing protein. (828 aa)
	T265_14648	RNA polymerase Rpb8. (156 aa)
	T265_08791	Peptidase A2 domain-containing protein. (1254 aa)
	T265_08878	RPOL4c domain-containing protein. (134 aa)
	T265_10196	Uncharacterized protein. (185 aa)
	T265_10272	Uncharacterized protein; Belongs to the cyclin family. (620 aa)
	T265_12142	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (98 aa)
	T265_16022	Uncharacterized protein. (193 aa)
	T265_10984	Uncharacterized protein. (2803 aa)
	T265_10065	CBFD_NFYB_HMF domain-containing protein. (508 aa)
	T265_11437	DUF4550 domain-containing protein. (878 aa)
	T265_10398	Uncharacterized protein. (2023 aa)
	T265_15186	Helicase C-terminal domain-containing protein. (1224 aa)
	T265_10596	Uncharacterized protein. (429 aa)
	T265_11460	Uncharacterized protein. (176 aa)
	T265_11911	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1785 aa)
	T265_12061	PHD-type domain-containing protein. (1052 aa)
	T265_12333	Uncharacterized protein. (44 aa)
	T265_00523	Uncharacterized protein. (298 aa)
	T265_00739	Uncharacterized protein. (373 aa)
	T265_02966	Uncharacterized protein. (808 aa)
	T265_13195	FMN_red domain-containing protein. (786 aa)
	T265_03300	DIRP domain-containing protein. (672 aa)
	T265_09760	Protein kinase domain-containing protein. (888 aa)
	T265_00086	Uncharacterized protein. (470 aa)
	T265_01404	TAFII28 domain-containing protein. (277 aa)
	T265_00326	Uncharacterized protein. (130 aa)
	T265_12509	Uncharacterized protein. (417 aa)
	T265_01590	Uncharacterized protein. (958 aa)
	T265_10220	Uncharacterized protein. (840 aa)
	T265_00433	Uncharacterized protein. (232 aa)
	T265_10407	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
	T265_15147	SANT domain-containing protein. (448 aa)
	T265_01798	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (170 aa)
	T265_00740	Uncharacterized protein. (1538 aa)
	T265_00835	PCI domain-containing protein. (390 aa)
	T265_10560	Uncharacterized protein; Belongs to the DEAD box helicase family. (417 aa)
	T265_10570	Uncharacterized protein. (416 aa)
	T265_01600	Uncharacterized protein. (874 aa)
	T265_01621	TAFII55_N domain-containing protein. (462 aa)
	T265_15386	MAT1 domain-containing protein. (1203 aa)
	T265_05368	Uncharacterized protein. (389 aa)
	T265_13266	Uncharacterized protein. (667 aa)
	T265_15604	Deacetylase sirtuin-type domain-containing protein. (466 aa)
	T265_05699	RPOLD domain-containing protein. (640 aa)
	T265_02565	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1393 aa)
	T265_12159	RNA_pol_Rpb1_5 domain-containing protein. (134 aa)
	T265_02684	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (1002 aa)
	T265_13439	Uncharacterized protein. (883 aa)
	T265_00004	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1846 aa)
	T265_00261	Uncharacterized protein. (931 aa)
	T265_00628	Homeobox domain-containing protein. (952 aa)
	T265_00902	TFIIB-type domain-containing protein. (142 aa)
	T265_12794	RNA_pol_L_2 domain-containing protein. (267 aa)
	T265_12826	Uncharacterized protein. (1076 aa)
	T265_02021	Uncharacterized protein. (1166 aa)
	T265_05686	Uncharacterized protein. (214 aa)
	T265_05902	Tau95_N domain-containing protein. (274 aa)
	T265_13991	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1203 aa)
	T265_00149	C2H2-type domain-containing protein. (625 aa)
	T265_00115	GCM domain-containing protein. (849 aa)
	T265_00110	TFIIS-type domain-containing protein. (197 aa)
	T265_06732	CID domain-containing protein. (961 aa)
	T265_14169	Uncharacterized protein. (274 aa)
	T265_12507	PHD-type domain-containing protein. (758 aa)
	T265_00950	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1150 aa)
	T265_14412	TFIID_20kDa domain-containing protein. (473 aa)
	T265_08010	CDC73_N domain-containing protein. (501 aa)
	T265_08087	Uncharacterized protein. (167 aa)
	T265_00138	Helicase ATP-binding domain-containing protein. (846 aa)
	T265_02353	Uncharacterized protein. (370 aa)
	T265_12508	Uncharacterized protein. (443 aa)
	T265_02708	Uncharacterized protein; Belongs to the DEAD box helicase family. (708 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00004	T265_00110	A0A075AJW9	A0A075ADJ7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TFIIS-type domain-containing protein.	0.522
T265_00004	T265_00138	A0A075AJW9	A0A075A7E3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Helicase ATP-binding domain-containing protein.	0.939
T265_00004	T265_00261	A0A075AJW9	A0A075AJW4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.954
T265_00004	T265_00433	A0A075AJW9	A0A075A221	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.969
T265_00004	T265_00950	A0A075AJW9	A0A075AB54	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.599
T265_00004	T265_01404	A0A075AJW9	A0A075A2Q0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TAFII28 domain-containing protein.	0.834
T265_00004	T265_01621	A0A075AJW9	A0A074ZYR4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TAFII55_N domain-containing protein.	0.714
T265_00004	T265_02353	A0A075AJW9	A0A075A705	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.964
T265_00004	T265_02684	A0A075AJW9	A0A074ZU55	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.663
T265_00004	T265_04351	A0A075AJW9	A0A074ZP35	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.951
T265_00004	T265_04366	A0A075AJW9	A0A074ZST7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TAFH domain-containing protein.	0.714
T265_00004	T265_04737	A0A075AJW9	A0A074ZMR4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.715
T265_00004	T265_04996	A0A075AJW9	A0A074ZQI4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Integrase catalytic domain-containing protein.	0.944
T265_00004	T265_05368	A0A075AJW9	A0A074ZWD8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.533
T265_00004	T265_05533	A0A075AJW9	A0A074ZJB6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.775
T265_00004	T265_05686	A0A075AJW9	A0A075AEZ5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.413
T265_00004	T265_05699	A0A075AJW9	A0A074ZV44	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOLD domain-containing protein.	0.968
T265_00004	T265_06245	A0A075AJW9	A0A074ZT17	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase K / subunit.	0.968
T265_00004	T265_06290	A0A075AJW9	A0A074ZH19	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.879
T265_00004	T265_06414	A0A075AJW9	A0A074ZG85	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.843