36 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_04925	Uncharacterized protein. (964 aa)
	T265_16294	tRNA-synt_1 domain-containing protein. (63 aa)
	T265_06528	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (610 aa)
	T265_12356	Uncharacterized protein. (41 aa)
	T265_02835	AA_TRNA_LIGASE_II domain-containing protein. (592 aa)
	T265_03456	AA_TRNA_LIGASE_II_ALA domain-containing protein. (1344 aa)
	T265_15554	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (341 aa)
	T265_13748	Uncharacterized protein. (1557 aa)
	T265_11386	Uncharacterized protein. (1207 aa)
	T265_02630	AA_TRNA_LIGASE_II domain-containing protein. (1171 aa)
	T265_01274	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (866 aa)
	T265_00610	Uncharacterized protein. (1292 aa)
	T265_15966	tRNA-synt_1c_C domain-containing protein. (90 aa)
	T265_15582	Uncharacterized protein. (1694 aa)
	T265_11299	Tyrosine--tRNA ligase. (1159 aa)
	T265_11659	DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (386 aa)
	T265_10380	AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (987 aa)
	T265_09084	Tryptophan--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (410 aa)
	T265_08946	Lysine--tRNA ligase. (644 aa)
	T265_08843	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1122 aa)
	T265_14369	Uncharacterized protein. (565 aa)
	T265_09842	tRNA-synt_1e domain-containing protein. (705 aa)
	T265_05757	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (212 aa)
	T265_14558	tRNA-synt_2b domain-containing protein. (297 aa)
	T265_13749	tRNA-synt_1 domain-containing protein. (257 aa)
	T265_05270	Tyrosine--tRNA ligase. (616 aa)
	T265_05275	AA_TRNA_LIGASE_II domain-containing protein. (550 aa)
	T265_13744	AA_TRNA_LIGASE_II domain-containing protein. (573 aa)
	T265_06076	Uncharacterized protein. (653 aa)
	T265_07943	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1355 aa)
	T265_13902	AA_TRNA_LIGASE_II domain-containing protein. (571 aa)
	T265_07791	Uncharacterized protein. (1201 aa)
	T265_13851	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (205 aa)
	T265_07520	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (387 aa)
	T265_03705	B5 domain-containing protein. (568 aa)
	T265_03819	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (629 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00610	T265_01274	A0A075A186	A0A075A0C6	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.829
T265_00610	T265_02630	A0A075A186	A0A074ZYK0	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.968
T265_00610	T265_02835	A0A075A186	A0A074ZUK2	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.963
T265_00610	T265_03456	A0A075A186	A0A074ZW29	Uncharacterized protein.	AA_TRNA_LIGASE_II_ALA domain-containing protein.	0.818
T265_00610	T265_03705	A0A075A186	A0A074ZQV9	Uncharacterized protein.	B5 domain-containing protein.	0.534
T265_00610	T265_03819	A0A075A186	A0A074ZR89	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.771
T265_00610	T265_04925	A0A075A186	A0A075AFX8	Uncharacterized protein.	Uncharacterized protein.	0.724
T265_00610	T265_05270	A0A075A186	A0A074ZKZ8	Uncharacterized protein.	Tyrosine--tRNA ligase.	0.809
T265_00610	T265_05275	A0A075A186	A0A074ZL01	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.732
T265_00610	T265_05757	A0A075A186	A0A074ZJI1	Uncharacterized protein.	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.629
T265_00610	T265_06076	A0A075A186	A0A074ZLT6	Uncharacterized protein.	Uncharacterized protein.	0.458
T265_00610	T265_06528	A0A075A186	A0A074ZS63	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.815
T265_00610	T265_07520	A0A075A186	A0A074ZNI0	Uncharacterized protein.	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.696
T265_00610	T265_07791	A0A075A186	A0A074ZML4	Uncharacterized protein.	Uncharacterized protein.	0.865
T265_00610	T265_07943	A0A075A186	A0A074ZLZ2	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.874
T265_00610	T265_08843	A0A075A186	A0A074Z7S2	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.736
T265_00610	T265_08946	A0A075A186	A0A074Z7C7	Uncharacterized protein.	Lysine--tRNA ligase.	0.802
T265_00610	T265_09084	A0A075A186	A0A074Z6U3	Uncharacterized protein.	Tryptophan--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.785
T265_00610	T265_09842	A0A075A186	A0A074ZFC6	Uncharacterized protein.	tRNA-synt_1e domain-containing protein.	0.816
T265_00610	T265_10380	A0A075A186	A0A074Z6S6	Uncharacterized protein.	AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	0.893