101 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_04992	UDENN domain-containing protein. (520 aa)
	T265_13635	Uncharacterized protein. (272 aa)
	T265_12873	Uncharacterized protein. (361 aa)
	T265_01406	SAC domain-containing protein. (1607 aa)
	T265_01298	VPS9 domain-containing protein. (1970 aa)
	T265_00949	Uncharacterized protein. (706 aa)
	T265_00829	Uncharacterized protein. (163 aa)
	T265_00684	F-BAR domain-containing protein. (1417 aa)
	T265_00359	UDENN domain-containing protein. (963 aa)
	T265_16066	Uncharacterized protein. (75 aa)
	T265_16023	Adaptin_N domain-containing protein. (73 aa)
	T265_12220	Uncharacterized protein. (161 aa)
	T265_15799	Uncharacterized protein. (142 aa)
	T265_12002	XK-related protein. (540 aa)
	T265_15547	Uncharacterized protein. (204 aa)
	T265_15490	Uncharacterized protein. (3643 aa)
	T265_11555	Ras family protein. (188 aa)
	T265_11477	EH domain-containing protein. (485 aa)
	T265_15239	VPS10 domain-containing protein. (685 aa)
	T265_11762	Uncharacterized protein. (143 aa)
	T265_15094	Uncharacterized protein. (147 aa)
	T265_10237	GAE domain-containing protein. (1397 aa)
	T265_15069	Uncharacterized protein. (592 aa)
	T265_16323	Uncharacterized protein. (104 aa)
	T265_09871	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (208 aa)
	T265_09818	Uncharacterized protein. (1080 aa)
	T265_10701	F-BAR domain-containing protein. (538 aa)
	T265_15948	Uncharacterized protein. (164 aa)
	T265_10432	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (221 aa)
	T265_08965	Uncharacterized protein. (331 aa)
	T265_10076	FSA_C domain-containing protein. (3274 aa)
	T265_15030	Uncharacterized protein. (691 aa)
	T265_15546	Transmembrane adaptor Erv26. (204 aa)
	T265_15520	CUB domain-containing protein. (193 aa)
	T265_11579	SH3 domain-containing protein. (549 aa)
	T265_11475	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (991 aa)
	T265_09208	Ig-like domain-containing protein. (2256 aa)
	T265_10825	Uncharacterized protein. (1149 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_10641	Tetraspanin. (252 aa)
	T265_14286	APG6 domain-containing protein. (100 aa)
	T265_10497	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (167 aa)
	T265_08468	Hrs_helical domain-containing protein. (486 aa)
	T265_07070	Uncharacterized protein. (198 aa)
	T265_08176	Uncharacterized protein. (323 aa)
	T265_06919	Arf-GAP domain-containing protein. (184 aa)
	T265_06764	PX domain-containing protein. (641 aa)
	T265_14462	Uncharacterized protein. (1692 aa)
	T265_09838	Folate_rec domain-containing protein. (265 aa)
	T265_06539	Uncharacterized protein. (627 aa)
	T265_07034	Uncharacterized protein. (1218 aa)
	T265_08964	Uncharacterized protein. (1398 aa)
	T265_14624	SH3 domain-containing protein. (926 aa)
	T265_05114	C2 domain-containing protein. (366 aa)
	T265_13687	Uncharacterized protein. (294 aa)
	T265_06188	Uncharacterized protein; Belongs to the adaptor complexes medium subunit family. (631 aa)
	T265_13959	Uncharacterized protein. (890 aa)
	T265_04680	Uncharacterized protein. (75 aa)
	T265_07810	Uncharacterized protein. (583 aa)
	T265_04627	Protein kinase domain-containing protein. (493 aa)
	T265_13566	ANTH domain-containing protein. (546 aa)
	T265_04191	Arrestin domain protein. (388 aa)
	T265_04201	Uncharacterized protein. (1022 aa)
	T265_03964	Uncharacterized protein. (486 aa)
	T265_05091	Arrestin_C domain-containing protein. (606 aa)
	T265_04939	Ion_trans domain-containing protein. (778 aa)
	T265_06868	Uncharacterized protein. (331 aa)
	T265_03445	Rho-GAP domain-containing protein. (694 aa)
	T265_03623	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (687 aa)
	T265_03347	Uncharacterized protein. (665 aa)
	T265_13534	Uncharacterized protein. (971 aa)
	T265_03450	ENTH domain-containing protein. (1455 aa)
	T265_04098	Uncharacterized protein. (441 aa)
	T265_13046	SAC domain-containing protein. (1493 aa)
	T265_05447	Uncharacterized protein. (542 aa)
	T265_02070	Uncharacterized protein. (426 aa)
	T265_03302	Phosphatidylinositol 3-kinase catalytic subunit type 3. (992 aa)
	T265_11700	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (754 aa)
	T265_02223	Tetraspanin. (225 aa)
	T265_01686	RING-CH-type domain-containing protein. (528 aa)
	T265_13600	Uncharacterized protein. (781 aa)
	T265_01430	Uncharacterized protein. (610 aa)
	T265_15072	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (546 aa)
	T265_15032	Uncharacterized protein. (790 aa)
	T265_13229	Arrestin_C domain-containing protein. (575 aa)
	T265_00190	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (450 aa)
	T265_09663	Protein kinase domain-containing protein. (340 aa)
	T265_00137	Uncharacterized protein. (419 aa)
	T265_09293	Uncharacterized protein. (756 aa)
	T265_14758	Clathrin-link domain-containing protein. (478 aa)
	T265_02585	Arrestin_C domain-containing protein. (626 aa)
	T265_08963	J domain-containing protein. (1106 aa)
	T265_01894	Uncharacterized protein. (541 aa)
	T265_01708	XK-related protein. (728 aa)
	T265_14359	Uncharacterized protein. (3872 aa)
	T265_01105	Arrestin_C domain-containing protein. (469 aa)
	T265_14305	Uncharacterized protein. (513 aa)
	T265_00837	Uncharacterized protein. (2600 aa)
	T265_00616	Uncharacterized protein. (566 aa)
	T265_00393	ENTH domain-containing protein. (737 aa)
	T265_04985	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (560 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00190	T265_06188	A0A075A3N6	A0A074ZLF1	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein; Belongs to the adaptor complexes medium subunit family.	0.629
T265_00190	T265_10237	A0A075A3N6	A0A074Z364	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	GAE domain-containing protein.	0.746
T265_00190	T265_10432	A0A075A3N6	A0A074Z6L6	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.560
T265_00190	T265_10825	A0A075A3N6	A0A074ZBW4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.518
T265_00190	T265_14758	A0A075A3N6	A0A075A635	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Clathrin-link domain-containing protein.	0.518
T265_00190	T265_16023	A0A075A3N6	A0A074YUV9	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Adaptin_N domain-containing protein.	0.746
T265_00359	T265_14462	A0A075AJT1	A0A074ZF36	UDENN domain-containing protein.	Uncharacterized protein.	0.542
T265_00393	T265_00616	A0A075ACP3	A0A075AC92	ENTH domain-containing protein.	Uncharacterized protein.	0.495
T265_00393	T265_00684	A0A075ACP3	A0A075AJG8	ENTH domain-containing protein.	F-BAR domain-containing protein.	0.513
T265_00393	T265_00949	A0A075ACP3	A0A075AJA5	ENTH domain-containing protein.	Uncharacterized protein.	0.407
T265_00393	T265_02070	A0A075ACP3	A0A074ZW93	ENTH domain-containing protein.	Uncharacterized protein.	0.584
T265_00393	T265_03450	A0A075ACP3	A0A074ZSI9	ENTH domain-containing protein.	ENTH domain-containing protein.	0.768
T265_00393	T265_03623	A0A075ACP3	A0A074ZRU3	ENTH domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.458
T265_00393	T265_03964	A0A075ACP3	A0A074ZPP6	ENTH domain-containing protein.	Uncharacterized protein.	0.685
T265_00393	T265_04098	A0A075ACP3	A0A074ZTW5	ENTH domain-containing protein.	Uncharacterized protein.	0.514
T265_00393	T265_04201	A0A075ACP3	A0A074ZNZ7	ENTH domain-containing protein.	Uncharacterized protein.	0.801
T265_00393	T265_05114	A0A075ACP3	A0A074ZKP7	ENTH domain-containing protein.	C2 domain-containing protein.	0.536
T265_00393	T265_06188	A0A075ACP3	A0A074ZLF1	ENTH domain-containing protein.	Uncharacterized protein; Belongs to the adaptor complexes medium subunit family.	0.751
T265_00393	T265_06539	A0A075ACP3	A0A074ZFR6	ENTH domain-containing protein.	Uncharacterized protein.	0.513
T265_00393	T265_06764	A0A075ACP3	A0A074ZEW9	ENTH domain-containing protein.	PX domain-containing protein.	0.529