7 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12075	PHB domain-containing protein. (315 aa)
	T265_04405	Uncharacterized protein. (577 aa)
	T265_03124	S1 motif domain-containing protein. (329 aa)
	T265_03904	SSD domain-containing protein. (1605 aa)
	T265_05934	Protein kinase domain-containing protein. (968 aa)
	T265_06044	Uncharacterized protein. (124 aa)
	T265_01157	BHLH domain-containing protein. (1060 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01157	T265_03904	A0A075A0I2	A0A074ZQM2	BHLH domain-containing protein.	SSD domain-containing protein.	0.947
T265_03124	T265_05934	A0A074ZTR9	A0A074ZIP7	S1 motif domain-containing protein.	Protein kinase domain-containing protein.	0.978
T265_03904	T265_01157	A0A074ZQM2	A0A075A0I2	SSD domain-containing protein.	BHLH domain-containing protein.	0.947
T265_03904	T265_06044	A0A074ZQM2	A0A074ZIF5	SSD domain-containing protein.	Uncharacterized protein.	0.947
T265_05934	T265_03124	A0A074ZIP7	A0A074ZTR9	Protein kinase domain-containing protein.	S1 motif domain-containing protein.	0.978
T265_06044	T265_03904	A0A074ZIF5	A0A074ZQM2	Uncharacterized protein.	SSD domain-containing protein.	0.947