114 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10231	Uncharacterized protein. (2188 aa)
	T265_12437	Uncharacterized protein. (2060 aa)
	T265_01155	Uncharacterized protein. (518 aa)
	T265_01697	Cytochrome c domain-containing protein. (264 aa)
	T265_01992	Uncharacterized protein. (414 aa)
	T265_03905	Uncharacterized protein. (751 aa)
	T265_03986	Uncharacterized protein. (280 aa)
	T265_03969	MutL_C domain-containing protein. (229 aa)
	T265_13398	Uncharacterized protein. (266 aa)
	T265_04400	Uncharacterized protein. (1067 aa)
	T265_04386	Uncharacterized protein. (1966 aa)
	T265_13550	RRM domain-containing protein. (630 aa)
	T265_04877	Uncharacterized protein; Belongs to the nanos family. (477 aa)
	T265_13741	t-SNARE coiled-coil homology domain-containing protein. (245 aa)
	T265_05931	Tafazzin family protein; Belongs to the taffazin family. (298 aa)
	T265_06677	IFT81_CH domain-containing protein. (739 aa)
	T265_00257	SPATA6 domain-containing protein. (316 aa)
	T265_00205	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3232 aa)
	T265_12558	Protein kinase domain-containing protein. (1336 aa)
	T265_06959	Uncharacterized protein. (84 aa)
	T265_07045	Reverse transcriptase domain-containing protein. (739 aa)
	T265_01224	Uncharacterized protein. (528 aa)
	T265_14402	Uncharacterized protein. (578 aa)
	T265_08339	Reverse transcriptase domain-containing protein. (1674 aa)
	T265_08495	SET domain-containing protein. (416 aa)
	T265_14594	Uncharacterized protein. (128 aa)
	T265_12982	Uncharacterized protein. (2575 aa)
	T265_00533	Uncharacterized protein. (877 aa)
	T265_14869	Uncharacterized protein. (114 aa)
	T265_00258	PITH domain-containing protein. (1925 aa)
	T265_01153	Uncharacterized protein. (373 aa)
	T265_12439	Uncharacterized protein. (134 aa)
	T265_03489	Uncharacterized protein. (376 aa)
	T265_12796	TSNAXIP1_N domain-containing protein. (693 aa)
	T265_13323	Uncharacterized protein. (184 aa)
	T265_01582	Uncharacterized protein. (533 aa)
	T265_03801	Uncharacterized protein. (1158 aa)
	T265_10230	Uncharacterized protein. (558 aa)
	T265_00396	Uncharacterized protein. (1495 aa)
	T265_12647	Uncharacterized protein. (1896 aa)
	T265_01776	Tyrosine-protein kinase. (1163 aa)
	T265_10312	Uncharacterized protein; Belongs to the NDK family. (801 aa)
	T265_13399	Uncharacterized protein. (161 aa)
	T265_00955	Uncharacterized protein. (1078 aa)
	T265_12730	Uncharacterized protein. (962 aa)
	T265_04319	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
	T265_02336	Uncharacterized protein. (1147 aa)
	T265_11221	Uncharacterized protein. (471 aa)
	T265_12862	Uncharacterized protein. (1083 aa)
	T265_11801	Uncharacterized protein; Belongs to the MT-A70-like family. (624 aa)
	T265_12937	Uncharacterized protein. (1486 aa)
	T265_13031	Uncharacterized protein. (2000 aa)
	T265_15941	Uncharacterized protein. (118 aa)
	T265_13947	Tyrosine-protein kinase. (1014 aa)
	T265_04258	Putative flagellar protein FliS. (968 aa)
	T265_04463	Uncharacterized protein. (341 aa)
	T265_14027	Uncharacterized protein. (107 aa)
	T265_03490	Uncharacterized protein. (814 aa)
	T265_14175	Uncharacterized protein. (210 aa)
	T265_04423	Uncharacterized protein. (942 aa)
	T265_07452	UBIQUITIN_CONJUGAT_2 domain-containing protein. (670 aa)
	T265_04383	YTH domain-containing protein. (918 aa)
	T265_05754	Uncharacterized protein. (339 aa)
	T265_04515	Chorein_N domain-containing protein. (4830 aa)
	T265_14403	Uncharacterized protein. (226 aa)
	T265_06343	TACC_C domain-containing protein. (1889 aa)
	T265_05347	Uncharacterized protein. (457 aa)
	T265_06462	Uncharacterized protein. (476 aa)
	T265_08475	Uncharacterized protein. (1259 aa)
	T265_13829	SCAPER_N domain-containing protein. (2080 aa)
	T265_13849	Uncharacterized protein. (181 aa)
	T265_05839	Uncharacterized protein. (622 aa)
	T265_14187	Uncharacterized protein. (831 aa)
	T265_14717	Uncharacterized protein. (662 aa)
	T265_06150	Uncharacterized protein; Belongs to the MT-A70-like family. (725 aa)
	T265_14870	Calponin-homology (CH) domain-containing protein. (3500 aa)
	T265_07722	Protein kinase domain-containing protein. (793 aa)
	T265_06597	Reverse transcriptase domain-containing protein. (1136 aa)
	T265_07985	Uncharacterized protein. (497 aa)
	T265_09895	Uncharacterized protein. (518 aa)
	T265_06960	Uncharacterized protein. (286 aa)
	T265_14518	Uncharacterized protein. (444 aa)
	T265_15076	Uncharacterized protein. (831 aa)
	T265_07084	Uncharacterized protein. (261 aa)
	T265_14563	CCHC-type domain-containing protein. (1835 aa)
	T265_15159	Uncharacterized protein. (708 aa)
	T265_08572	Uncharacterized protein. (326 aa)
	T265_14676	PHD-type domain-containing protein. (755 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_07793	Uncharacterized protein. (593 aa)
	T265_07721	Uncharacterized protein. (203 aa)
	T265_14401	Uncharacterized protein. (202 aa)
	T265_11013	Mothers against decapentaplegic homolog. (790 aa)
	T265_07830	Uncharacterized protein. (1217 aa)
	T265_07828	CH_2 domain-containing protein. (351 aa)
	T265_14449	Uncharacterized protein. (394 aa)
	T265_15380	Helicase C-terminal domain-containing protein. (1185 aa)
	T265_08469	NDK domain-containing protein; Belongs to the NDK family. (298 aa)
	T265_09902	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3314 aa)
	T265_14655	Uncharacterized protein. (532 aa)
	T265_09957	Uncharacterized protein. (138 aa)
	T265_08800	Uncharacterized protein. (729 aa)
	T265_12030	Uncharacterized protein. (293 aa)
	T265_15952	Uncharacterized protein. (142 aa)
	T265_10935	Uncharacterized protein. (2749 aa)
	T265_10033	Fork-head domain-containing protein. (963 aa)
	T265_10190	CRAL-TRIO domain-containing protein. (243 aa)
	T265_10319	Uncharacterized protein. (160 aa)
	T265_11562	SH3 domain-containing protein. (683 aa)
	T265_11561	Uncharacterized protein. (164 aa)
	T265_15945	Uncharacterized protein. (140 aa)
	T265_15987	TMF_TATA_bd domain-containing protein. (103 aa)
	T265_16127	Uncharacterized protein. (63 aa)
	T265_16078	Uncharacterized protein. (113 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00205	T265_01582	A0A075AD54	A0A075A280	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.675
T265_00205	T265_02336	A0A075AD54	A0A074ZZI1	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.604
T265_00205	T265_03969	A0A075AD54	A0A075AH63	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	MutL_C domain-containing protein.	0.509
T265_00205	T265_04386	A0A075AD54	A0A075AGL6	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.698
T265_00205	T265_09902	A0A075AD54	A0A074Z8G6	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.518
T265_00205	T265_14187	A0A075AD54	A0A074ZIH0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.825
T265_00533	T265_00955	A0A075A5R3	A0A075A105	Uncharacterized protein.	Uncharacterized protein.	0.424
T265_00533	T265_12647	A0A075A5R3	A0A075A1T5	Uncharacterized protein.	Uncharacterized protein.	0.497
T265_00955	T265_00533	A0A075A105	A0A075A5R3	Uncharacterized protein.	Uncharacterized protein.	0.424
T265_00955	T265_06150	A0A075A105	A0A074ZHF2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.507
T265_00955	T265_11801	A0A075A105	A0A074ZW53	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.617
T265_00955	T265_12647	A0A075A105	A0A075A1T5	Uncharacterized protein.	Uncharacterized protein.	0.434
T265_01224	T265_07828	A0A075AAF0	A0A074ZB35	Uncharacterized protein.	CH_2 domain-containing protein.	0.418
T265_01224	T265_07830	A0A075AAF0	A0A074ZB41	Uncharacterized protein.	Uncharacterized protein.	0.418
T265_01224	T265_13031	A0A075AAF0	A0A074ZUV3	Uncharacterized protein.	Uncharacterized protein.	0.686
T265_01224	T265_13323	A0A075AAF0	A0A075A2E3	Uncharacterized protein.	Uncharacterized protein.	0.478
T265_01224	T265_14027	A0A075AAF0	A0A074ZSF3	Uncharacterized protein.	Uncharacterized protein.	0.447
T265_01224	T265_14401	A0A075AAF0	A0A074ZBJ6	Uncharacterized protein.	Uncharacterized protein.	0.418
T265_01224	T265_14402	A0A075AAF0	A0A075AAB5	Uncharacterized protein.	Uncharacterized protein.	0.418
T265_01224	T265_14403	A0A075AAF0	A0A074ZMC1	Uncharacterized protein.	Uncharacterized protein.	0.418