30 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11948	WD_REPEATS_REGION domain-containing protein. (665 aa)
	T265_15030	Uncharacterized protein. (691 aa)
	T265_09203	Uncharacterized protein. (1249 aa)
	T265_09065	Uncharacterized protein. (1874 aa)
	T265_06415	Fork-head domain-containing protein. (988 aa)
	T265_04901	TPR_REGION domain-containing protein. (370 aa)
	T265_11907	Uncharacterized protein. (260 aa)
	T265_05423	Uncharacterized protein. (69 aa)
	T265_03370	Uncharacterized protein. (90 aa)
	T265_16257	Uncharacterized protein. (69 aa)
	T265_02852	Homeobox domain-containing protein. (500 aa)
	T265_15771	Uncharacterized protein. (345 aa)
	T265_10860	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1980 aa)
	T265_12608	Uncharacterized protein. (454 aa)
	T265_10254	Enkurin domain-containing protein. (261 aa)
	T265_01536	KH domain-containing protein. (597 aa)
	T265_01254	Suppressor of fused protein. (977 aa)
	T265_12527	WD_REPEATS_REGION domain-containing protein. (695 aa)
	T265_00214	Uncharacterized protein. (452 aa)
	T265_15770	Uncharacterized protein. (111 aa)
	T265_00999	Uncharacterized protein. (942 aa)
	T265_16222	RPGR1_C domain-containing protein. (113 aa)
	T265_15583	Uncharacterized protein. (969 aa)
	T265_02270	Uncharacterized protein. (231 aa)
	T265_12607	Uncharacterized protein. (159 aa)
	T265_07130	Uncharacterized protein. (1243 aa)
	T265_00387	Uncharacterized protein. (1126 aa)
	T265_12487	Uncharacterized protein. (310 aa)
	T265_02269	Uncharacterized protein. (570 aa)
	T265_11523	Uncharacterized protein. (671 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00214	T265_01254	A0A075A3T2	A0A075A3E2	Uncharacterized protein.	Suppressor of fused protein.	0.628
T265_00214	T265_04901	A0A075A3T2	A0A074ZMD7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.554
T265_00214	T265_09065	A0A075A3T2	A0A074ZBG6	Uncharacterized protein.	Uncharacterized protein.	0.838
T265_00214	T265_11523	A0A075A3T2	A0A074YYQ2	Uncharacterized protein.	Uncharacterized protein.	0.984
T265_00214	T265_15030	A0A075A3T2	A0A074Z823	Uncharacterized protein.	Uncharacterized protein.	0.525
T265_00387	T265_00999	A0A075AD09	A0A075A499	Uncharacterized protein.	Uncharacterized protein.	0.586
T265_00387	T265_03370	A0A075AD09	A0A074ZRQ7	Uncharacterized protein.	Uncharacterized protein.	0.410
T265_00387	T265_04901	A0A075AD09	A0A074ZMD7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.452
T265_00387	T265_05423	A0A075AD09	A0A074ZP02	Uncharacterized protein.	Uncharacterized protein.	0.722
T265_00387	T265_11948	A0A075AD09	A0A074Z155	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.570
T265_00387	T265_12487	A0A075AD09	A0A075AD69	Uncharacterized protein.	Uncharacterized protein.	0.529
T265_00387	T265_15583	A0A075AD09	A0A074YWX8	Uncharacterized protein.	Uncharacterized protein.	0.410
T265_00387	T265_16257	A0A075AD09	A0A074ZSB7	Uncharacterized protein.	Uncharacterized protein.	0.410
T265_00999	T265_00387	A0A075A499	A0A075AD09	Uncharacterized protein.	Uncharacterized protein.	0.586
T265_00999	T265_03370	A0A075A499	A0A074ZRQ7	Uncharacterized protein.	Uncharacterized protein.	0.473
T265_00999	T265_12487	A0A075A499	A0A075AD69	Uncharacterized protein.	Uncharacterized protein.	0.548
T265_00999	T265_15583	A0A075A499	A0A074YWX8	Uncharacterized protein.	Uncharacterized protein.	0.473
T265_00999	T265_16257	A0A075A499	A0A074ZSB7	Uncharacterized protein.	Uncharacterized protein.	0.473
T265_01254	T265_00214	A0A075A3E2	A0A075A3T2	Suppressor of fused protein.	Uncharacterized protein.	0.628
T265_01254	T265_10860	A0A075A3E2	A0A074ZZP7	Suppressor of fused protein.	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.823