55 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11083	Uncharacterized protein. (227 aa)
	T265_12818	Uncharacterized protein. (540 aa)
	T265_02419	WD_REPEATS_REGION domain-containing protein. (2272 aa)
	T265_13018	Non-specific serine/threonine protein kinase. (751 aa)
	T265_13262	Uncharacterized protein. (1378 aa)
	T265_00185	Uncharacterized protein. (2063 aa)
	T265_07027	Uncharacterized protein. (3998 aa)
	T265_07174	Uncharacterized protein. (483 aa)
	T265_14359	Uncharacterized protein. (3872 aa)
	T265_01413	Protein kinase domain-containing protein. (1185 aa)
	T265_14534	Uncharacterized protein. (70 aa)
	T265_08500	Uncharacterized protein. (418 aa)
	T265_08788	Uncharacterized protein. (701 aa)
	T265_00022	BZIP transcription factor. (760 aa)
	T265_12465	Uncharacterized protein. (331 aa)
	T265_02528	RWD domain protein. (329 aa)
	T265_02981	Uncharacterized protein. (888 aa)
	T265_01414	Protein kinase domain-containing protein. (211 aa)
	T265_15134	SPX domain-containing protein. (443 aa)
	T265_00896	UDENN FLCN/SMCR8-type domain-containing protein. (723 aa)
	T265_13374	Uncharacterized protein. (1180 aa)
	T265_12615	WD_REPEATS_REGION domain-containing protein. (1057 aa)
	T265_13523	Uncharacterized protein. (897 aa)
	T265_15308	Uncharacterized protein. (695 aa)
	T265_04794	DEP domain-containing protein. (862 aa)
	T265_02114	Uncharacterized protein. (305 aa)
	T265_11486	Uncharacterized protein. (111 aa)
	T265_03302	Phosphatidylinositol 3-kinase catalytic subunit type 3. (992 aa)
	T265_02025	WD_REPEATS_REGION domain-containing protein. (1238 aa)
	T265_03322	Uncharacterized protein. (608 aa)
	T265_05346	Uncharacterized protein. (54 aa)
	T265_05397	Uncharacterized protein. (418 aa)
	T265_02386	Uncharacterized protein. (885 aa)
	T265_03934	TOG domain-containing protein. (2826 aa)
	T265_03124	S1 motif domain-containing protein. (329 aa)
	T265_04798	Uncharacterized protein. (1442 aa)
	T265_14535	Uncharacterized protein. (64 aa)
	T265_05226	Uncharacterized protein. (1341 aa)
	T265_07021	Uncharacterized protein. (810 aa)
	T265_14001	Uncharacterized protein. (688 aa)
	T265_07028	Uncharacterized protein. (460 aa)
	T265_14286	APG6 domain-containing protein. (100 aa)
	T265_14328	Uncharacterized protein. (1345 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_15339	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1295 aa)
	T265_08225	BZIP domain-containing protein. (216 aa)
	T265_08849	Uncharacterized protein. (1217 aa)
	T265_15135	EXS domain-containing protein. (624 aa)
	T265_10649	Protein kinase domain-containing protein. (556 aa)
	T265_11589	Uncharacterized protein. (1720 aa)
	T265_11998	Uncharacterized protein. (386 aa)
	T265_15989	Zinc_ribbon_16 domain-containing protein. (151 aa)
	T265_15923	Uncharacterized protein. (220 aa)
	T265_12366	Uncharacterized protein. (137 aa)
	T265_11297	Uncharacterized protein. (332 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00022	T265_08225	A0A075A736	A0A074Z9V0	BZIP transcription factor.	BZIP domain-containing protein.	0.628
T265_00022	T265_14359	A0A075A736	A0A075AAW6	BZIP transcription factor.	Uncharacterized protein.	0.567
T265_00185	T265_02025	A0A075AD27	A0A074ZWF8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.847
T265_00185	T265_02386	A0A075AD27	A0A074ZW35	Uncharacterized protein.	Uncharacterized protein.	0.893
T265_00185	T265_02419	A0A075AD27	A0A075AIC0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.477
T265_00185	T265_03302	A0A075AD27	A0A074ZWI7	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.999
T265_00185	T265_05226	A0A075AD27	A0A074ZKE9	Uncharacterized protein.	Uncharacterized protein.	0.440
T265_00185	T265_05346	A0A075AD27	A0A074ZW87	Uncharacterized protein.	Uncharacterized protein.	0.789
T265_00185	T265_05397	A0A075AD27	A0A074ZW36	Uncharacterized protein.	Uncharacterized protein.	0.789
T265_00185	T265_10649	A0A075AD27	A0A074Z5U3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.423
T265_00185	T265_11486	A0A075AD27	A0A074ZXB3	Uncharacterized protein.	Uncharacterized protein.	0.440
T265_00185	T265_11998	A0A075AD27	A0A074Z0X5	Uncharacterized protein.	Uncharacterized protein.	0.520
T265_00185	T265_12465	A0A075AD27	A0A075A6H6	Uncharacterized protein.	Uncharacterized protein.	0.603
T265_00185	T265_13018	A0A075AD27	A0A075AIA4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.679
T265_00185	T265_13262	A0A075AD27	A0A075AHJ2	Uncharacterized protein.	Uncharacterized protein.	0.440
T265_00185	T265_13374	A0A075AD27	A0A075A1I4	Uncharacterized protein.	Uncharacterized protein.	0.694
T265_00185	T265_14001	A0A075AD27	A0A074ZGL0	Uncharacterized protein.	Uncharacterized protein.	0.603
T265_00185	T265_14286	A0A075AD27	A0A074ZCJ9	Uncharacterized protein.	APG6 domain-containing protein.	0.999
T265_00185	T265_15923	A0A075AD27	A0A074YVC9	Uncharacterized protein.	Uncharacterized protein.	0.440
T265_00896	T265_02981	A0A075A1J2	A0A075A4X9	UDENN FLCN/SMCR8-type domain-containing protein.	Uncharacterized protein.	0.540