93 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_08788	Uncharacterized protein. (701 aa)
	T265_13205	AAA domain-containing protein; Belongs to the AAA ATPase family. (426 aa)
	T265_03438	Uncharacterized protein. (121 aa)
	T265_04798	Uncharacterized protein. (1442 aa)
	T265_14178	Endo/exonuclease/phosphatase domain-containing protein. (745 aa)
	T265_04013	Endo/exonuclease/phosphatase domain-containing protein. (335 aa)
	T265_07537	mRNA_decap_C domain-containing protein. (557 aa)
	T265_07694	ANK_REP_REGION domain-containing protein. (239 aa)
	T265_06120	Uncharacterized protein. (256 aa)
	T265_05078	YTH domain-containing protein. (804 aa)
	T265_14581	Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (365 aa)
	T265_09179	RPOL4c domain-containing protein. (260 aa)
	T265_06150	Uncharacterized protein; Belongs to the MT-A70-like family. (725 aa)
	T265_06276	Endo/exonuclease/phosphatase domain-containing protein. (867 aa)
	T265_09410	WD_REPEATS_REGION domain-containing protein. (678 aa)
	T265_14407	Uncharacterized protein. (1114 aa)
	T265_10021	RBR-type E3 ubiquitin transferase. (530 aa)
	T265_10186	YTH domain-containing protein. (785 aa)
	T265_14563	CCHC-type domain-containing protein. (1835 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_15339	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1295 aa)
	T265_07915	Uncharacterized protein. (1195 aa)
	T265_11122	zf-UBP_var domain-containing protein. (400 aa)
	T265_11109	Uncharacterized protein; Belongs to the peptidase C19 family. (420 aa)
	T265_08112	Uncharacterized protein. (87 aa)
	T265_08269	Uncharacterized protein. (425 aa)
	T265_14531	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (336 aa)
	T265_08645	AAA domain-containing protein; Belongs to the AAA ATPase family. (623 aa)
	T265_10453	Uncharacterized protein. (741 aa)
	T265_11222	RBR-type E3 ubiquitin transferase. (511 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (220 aa)
	T265_11589	Uncharacterized protein. (1720 aa)
	T265_15214	BAG domain-containing protein. (403 aa)
	T265_12051	Uncharacterized protein. (759 aa)
	T265_11084	UBA domain-containing protein. (1317 aa)
	T265_11083	Uncharacterized protein. (227 aa)
	T265_15500	Uncharacterized protein. (702 aa)
	T265_11926	PIPK domain-containing protein. (518 aa)
	T265_11843	RING-type domain-containing protein. (788 aa)
	T265_12077	Protein kinase domain-containing protein. (400 aa)
	T265_01325	RING-type domain-containing protein. (356 aa)
	T265_00433	Uncharacterized protein. (232 aa)
	T265_10217	AAA domain-containing protein; Belongs to the AAA ATPase family. (292 aa)
	T265_09919	Uncharacterized protein. (2924 aa)
	T265_03236	Reverse transcriptase domain-containing protein. (364 aa)
	T265_02981	Uncharacterized protein. (888 aa)
	T265_12475	PX domain-containing protein. (403 aa)
	T265_08813	AAA domain-containing protein; Belongs to the AAA ATPase family. (417 aa)
	T265_02910	Protein kinase domain-containing protein. (429 aa)
	T265_14594	Uncharacterized protein. (128 aa)
	T265_08382	RNase_PH domain-containing protein. (793 aa)
	T265_01847	Uncharacterized protein. (647 aa)
	T265_01354	CAF1 family ribonuclease. (418 aa)
	T265_00616	Uncharacterized protein. (566 aa)
	T265_07214	Uncharacterized protein. (391 aa)
	T265_00379	Protein kinase domain-containing protein. (1054 aa)
	T265_06105	Uncharacterized protein. (217 aa)
	T265_04895	Aminotran_1_2 domain-containing protein. (607 aa)
	T265_04563	Uncharacterized protein. (399 aa)
	T265_13477	NOT2_3_5 domain-containing protein. (792 aa)
	T265_03772	Uncharacterized protein. (2837 aa)
	T265_13321	Uncharacterized protein. (751 aa)
	T265_13018	Non-specific serine/threonine protein kinase. (751 aa)
	T265_12939	Uncharacterized protein. (300 aa)
	T265_01653	Uncharacterized protein. (418 aa)
	T265_00173	Uncharacterized protein. (981 aa)
	T265_10927	Tr-type G domain-containing protein. (691 aa)
	T265_01417	Reverse transcriptase domain-containing protein. (279 aa)
	T265_00891	KH_dom_type_1 domain-containing protein. (323 aa)
	T265_03848	Pan3_PK domain-containing protein. (877 aa)
	T265_10611	AAA domain-containing protein; Belongs to the AAA ATPase family. (442 aa)
	T265_01934	CPSF_A domain-containing protein. (1330 aa)
	T265_01973	Uncharacterized protein. (408 aa)
	T265_00896	UDENN FLCN/SMCR8-type domain-containing protein. (723 aa)
	T265_05240	Uncharacterized protein. (2897 aa)
	T265_01982	AAA domain-containing protein; Belongs to the AAA ATPase family. (386 aa)
	T265_05234	Protein kinase domain-containing protein. (637 aa)
	T265_02911	Protein kinase domain-containing protein. (624 aa)
	T265_13131	Ras-GAP domain-containing protein. (330 aa)
	T265_13642	ATG11 domain-containing protein. (1646 aa)
	T265_02894	SAM domain-containing protein. (1388 aa)
	T265_01606	RBR-type E3 ubiquitin transferase. (769 aa)
	T265_04794	DEP domain-containing protein. (862 aa)
	T265_02634	KH_dom_type_1 domain-containing protein. (389 aa)
	T265_01440	RBR-type E3 ubiquitin transferase. (369 aa)
	T265_11108	Ubiquitin carboxyl-terminal hydrolase. (635 aa)
	T265_11089	Uncharacterized protein. (879 aa)
	T265_02025	WD_REPEATS_REGION domain-containing protein. (1238 aa)
	T265_03322	Uncharacterized protein. (608 aa)
	T265_13320	Uncharacterized protein. (202 aa)
	T265_13104	Uncharacterized protein. (819 aa)
	T265_06111	RBR-type E3 ubiquitin transferase. (447 aa)
	T265_02916	Uncharacterized protein. (907 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	T265_01354	A0A074Z2V9	A0A075AAA6	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	CAF1 family ribonuclease.	0.483
LSM1	T265_02916	A0A074Z2V9	A0A074ZTD8	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Uncharacterized protein.	0.731
LSM1	T265_07537	A0A074Z2V9	A0A074ZNK1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	mRNA_decap_C domain-containing protein.	0.798
LSM1	T265_14581	A0A074Z2V9	A0A074ZK33	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.	0.838
T265_00379	T265_02025	A0A075AD05	A0A074ZWF8	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.727
T265_00379	T265_12051	A0A075AD05	A0A074Z0M1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.729
T265_00379	T265_12475	A0A075AD05	A0A075A6K2	Protein kinase domain-containing protein.	PX domain-containing protein.	0.701
T265_00379	T265_13018	A0A075AD05	A0A075AIA4	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.789
T265_00379	T265_13642	A0A075AD05	A0A074ZXR0	Protein kinase domain-containing protein.	ATG11 domain-containing protein.	0.992
T265_00433	T265_01934	A0A075A221	A0A075A0S2	Uncharacterized protein.	CPSF_A domain-containing protein.	0.879
T265_00433	T265_06150	A0A075A221	A0A074ZHF2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MT-A70-like family.	0.601
T265_00433	T265_09179	A0A075A221	A0A074ZHS0	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
T265_00433	T265_09410	A0A075A221	A0A074ZH00	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.447
T265_00433	T265_11084	A0A075A221	A0A074Z0A1	Uncharacterized protein.	UBA domain-containing protein.	0.562
T265_00616	T265_12051	A0A075AC92	A0A074Z0M1	Uncharacterized protein.	Uncharacterized protein.	0.601
T265_00616	T265_12475	A0A075AC92	A0A075A6K2	Uncharacterized protein.	PX domain-containing protein.	0.601
T265_00891	T265_02634	A0A075A0J1	A0A074ZYK4	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.867
T265_00891	T265_07214	A0A075A0J1	A0A075AC98	KH_dom_type_1 domain-containing protein.	Uncharacterized protein.	0.738
T265_00891	T265_08382	A0A075A0J1	A0A075A8M0	KH_dom_type_1 domain-containing protein.	RNase_PH domain-containing protein.	0.556
T265_00896	T265_02981	A0A075A1J2	A0A075A4X9	UDENN FLCN/SMCR8-type domain-containing protein.	Uncharacterized protein.	0.540