Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM4 | A0A074Z2V9 | A0A074ZFN5 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | T265_00220 | A0A074Z2V9 | A0A075A2T8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.547 |
| LSM1 | T265_01304 | A0A074Z2V9 | A0A075AA29 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.444 |
| LSM1 | T265_01354 | A0A074Z2V9 | A0A075AAA6 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | CAF1 family ribonuclease. | 0.483 |
| LSM1 | T265_02354 | A0A074Z2V9 | A0A074ZWD1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.502 |
| LSM1 | T265_02916 | A0A074Z2V9 | A0A074ZTD8 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.731 |
| LSM1 | T265_04125 | A0A074Z2V9 | A0A075A119 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.671 |
| LSM1 | T265_04375 | A0A074Z2V9 | A0A074ZSV0 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Ge1_WD40 domain-containing protein. | 0.784 |
| LSM1 | T265_07537 | A0A074Z2V9 | A0A074ZNK1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | mRNA_decap_C domain-containing protein. | 0.798 |
| LSM1 | T265_07587 | A0A074Z2V9 | A0A075AB66 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.976 |
| LSM1 | T265_08657 | A0A074Z2V9 | A0A074Z899 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.410 |
| LSM1 | T265_11668 | A0A074Z2V9 | A0A074YXU2 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | 0.998 |
| LSM1 | T265_13995 | A0A074Z2V9 | A0A074ZSV3 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Uncharacterized protein. | 0.868 |
| LSM1 | T265_14581 | A0A074Z2V9 | A0A074ZK33 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | 0.838 |
| LSM1 | T265_15451 | A0A074Z2V9 | A0A074Z2S3 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | Smg4_UPF3 domain-containing protein. | 0.501 |
| LSM4 | LSM1 | A0A074ZFN5 | A0A074Z2V9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.999 |
| LSM4 | T265_00681 | A0A074ZFN5 | A0A075ABW9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | FHA domain-containing protein. | 0.880 |
| LSM4 | T265_01122 | A0A074ZFN5 | A0A075AAL2 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.432 |
| LSM4 | T265_01304 | A0A074ZFN5 | A0A075AA29 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.564 |
| LSM4 | T265_02916 | A0A074ZFN5 | A0A074ZTD8 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.836 |
page 1 of 80