(11 nodes) SWI/SNF complex network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_07270	SWIB domain-containing protein. (551 aa)
	T265_16001	HSA domain-containing protein. (411 aa)
	T265_07301	ARID domain-containing protein. (2947 aa)
	T265_08666	Uncharacterized protein. (179 aa)
	T265_05055	Uncharacterized protein. (572 aa)
	T265_12389	Uncharacterized protein. (99 aa)
	T265_00276	Uncharacterized protein. (1305 aa)
	T265_03399	Uncharacterized protein. (1460 aa)
	T265_02983	HMG box domain-containing protein. (1115 aa)
	T265_02371	Uncharacterized protein. (444 aa)
	T265_12763	Uncharacterized protein; Belongs to the actin family. (426 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00276	T265_02371	A0A075AJW7	A0A075A6N6	Uncharacterized protein.	Uncharacterized protein.	0.964
T265_00276	T265_02983	A0A075AJW7	A0A074ZXH8	Uncharacterized protein.	HMG box domain-containing protein.	0.973
T265_00276	T265_03399	A0A075AJW7	A0A074ZW83	Uncharacterized protein.	Uncharacterized protein.	0.975
T265_00276	T265_05055	A0A075AJW7	A0A074ZKX9	Uncharacterized protein.	Uncharacterized protein.	0.587
T265_00276	T265_07270	A0A075AJW7	A0A075AC21	Uncharacterized protein.	SWIB domain-containing protein.	0.898
T265_00276	T265_07301	A0A075AJW7	A0A074ZHK6	Uncharacterized protein.	ARID domain-containing protein.	0.973
T265_00276	T265_08666	A0A075AJW7	A0A074ZJB0	Uncharacterized protein.	Uncharacterized protein.	0.424
T265_00276	T265_12389	A0A075AJW7	A0A074ZRV4	Uncharacterized protein.	Uncharacterized protein.	0.898
T265_00276	T265_12763	A0A075AJW7	A0A075AA05	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.958
T265_00276	T265_16001	A0A075AJW7	A0A074YZ84	Uncharacterized protein.	HSA domain-containing protein.	0.933
T265_02371	T265_00276	A0A075A6N6	A0A075AJW7	Uncharacterized protein.	Uncharacterized protein.	0.964
T265_02371	T265_02983	A0A075A6N6	A0A074ZXH8	Uncharacterized protein.	HMG box domain-containing protein.	0.987
T265_02371	T265_03399	A0A075A6N6	A0A074ZW83	Uncharacterized protein.	Uncharacterized protein.	0.999
T265_02371	T265_05055	A0A075A6N6	A0A074ZKX9	Uncharacterized protein.	Uncharacterized protein.	0.772
T265_02371	T265_07270	A0A075A6N6	A0A075AC21	Uncharacterized protein.	SWIB domain-containing protein.	0.973
T265_02371	T265_07301	A0A075A6N6	A0A074ZHK6	Uncharacterized protein.	ARID domain-containing protein.	0.979
T265_02371	T265_08666	A0A075A6N6	A0A074ZJB0	Uncharacterized protein.	Uncharacterized protein.	0.664
T265_02371	T265_12389	A0A075A6N6	A0A074ZRV4	Uncharacterized protein.	Uncharacterized protein.	0.973
T265_02371	T265_12763	A0A075A6N6	A0A075AA05	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.984
T265_02371	T265_16001	A0A075A6N6	A0A074YZ84	Uncharacterized protein.	HSA domain-containing protein.	0.964