(27 nodes) Histone deacetylation network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_14142	Deacetylase sirtuin-type domain-containing protein. (349 aa)
	T265_16279	Uncharacterized protein. (107 aa)
	T265_09811	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (505 aa)
	T265_11517	MBD domain-containing protein. (355 aa)
	T265_10265	Deacetylase sirtuin-type domain-containing protein. (374 aa)
	T265_06715	Uncharacterized protein. (1381 aa)
	T265_04914	Sds3-like protein. (269 aa)
	T265_09425	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (557 aa)
	T265_00467	Hist_deacetyl domain-containing protein. (1165 aa)
	T265_00752	MRG domain-containing protein. (410 aa)
	T265_02474	ELM2 domain-containing protein. (603 aa)
	T265_15604	Deacetylase sirtuin-type domain-containing protein. (466 aa)
	T265_03747	Uncharacterized protein. (770 aa)
	T265_06719	GATA-type domain-containing protein. (437 aa)
	T265_05994	C2H2-type domain-containing protein. (1705 aa)
	T265_13667	Uncharacterized protein. (1279 aa)
	T265_05767	WD_REPEATS_REGION domain-containing protein. (473 aa)
	T265_14639	Uncharacterized protein. (1019 aa)
	T265_16283	ELM2 domain-containing protein. (85 aa)
	T265_08686	HDAC_interact domain-containing protein. (1652 aa)
	T265_08445	Deacetylase sirtuin-type domain-containing protein. (947 aa)
	T265_08323	Hist_deacetyl domain-containing protein. (604 aa)
	T265_06714	Hist_deacetyl domain-containing protein. (1010 aa)
	T265_13169	Uncharacterized protein. (446 aa)
	T265_13112	Deacetylase sirtuin-type domain-containing protein. (1694 aa)
	T265_02802	WD_REPEATS_REGION domain-containing protein. (703 aa)
	T265_09123	Uncharacterized protein. (923 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00467	T265_00752	A0A075A266	A0A075A144	Hist_deacetyl domain-containing protein.	MRG domain-containing protein.	0.712
T265_00467	T265_02474	A0A075A266	A0A074ZW04	Hist_deacetyl domain-containing protein.	ELM2 domain-containing protein.	0.496
T265_00467	T265_02802	A0A075A266	A0A075AI21	Hist_deacetyl domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.549
T265_00467	T265_03747	A0A075A266	A0A074ZV70	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.565
T265_00467	T265_04914	A0A075A266	A0A074ZME5	Hist_deacetyl domain-containing protein.	Sds3-like protein.	0.599
T265_00467	T265_05767	A0A075A266	A0A074ZJL6	Hist_deacetyl domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.588
T265_00467	T265_06719	A0A075A266	A0A074ZFE6	Hist_deacetyl domain-containing protein.	GATA-type domain-containing protein.	0.544
T265_00467	T265_08323	A0A075A266	A0A075A8S6	Hist_deacetyl domain-containing protein.	Hist_deacetyl domain-containing protein.	0.544
T265_00467	T265_08445	A0A075A266	A0A075A8D7	Hist_deacetyl domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.473
T265_00467	T265_08686	A0A075A266	A0A074Z875	Hist_deacetyl domain-containing protein.	HDAC_interact domain-containing protein.	0.779
T265_00467	T265_09123	A0A075A266	A0A074ZB95	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.565
T265_00467	T265_09425	A0A075A266	A0A075A4Z8	Hist_deacetyl domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.533
T265_00467	T265_09811	A0A075A266	A0A074ZFG6	Hist_deacetyl domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.529
T265_00467	T265_11517	A0A075A266	A0A074YYR1	Hist_deacetyl domain-containing protein.	MBD domain-containing protein.	0.640
T265_00467	T265_13169	A0A075A266	A0A075AHU3	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.496
T265_00467	T265_14639	A0A075A266	A0A074ZJB5	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.599
T265_00467	T265_16279	A0A075A266	A0A074ZS43	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.496
T265_00467	T265_16283	A0A075A266	A0A074Z4A0	Hist_deacetyl domain-containing protein.	ELM2 domain-containing protein.	0.496
T265_00752	T265_00467	A0A075A144	A0A075A266	MRG domain-containing protein.	Hist_deacetyl domain-containing protein.	0.712
T265_00752	T265_03747	A0A075A144	A0A074ZV70	MRG domain-containing protein.	Uncharacterized protein.	0.411