(12 nodes) Translesion synthesis network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_08335	ApaG domain-containing protein. (367 aa)
	T265_02287	Uncharacterized protein. (1570 aa)
	T265_07578	Uncharacterized protein. (507 aa)
	T265_09593	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	T265_02897	UmuC domain-containing protein. (822 aa)
	T265_08544	WD_REPEATS_REGION domain-containing protein. (860 aa)
	T265_01557	Uncharacterized protein. (560 aa)
	T265_07576	UmuC domain-containing protein. (435 aa)
	T265_13833	DNA polymerase epsilon subunit B. (617 aa)
	T265_10775	SprT-like domain-containing protein. (484 aa)
	T265_13682	Uncharacterized protein. (566 aa)
	T265_01639	DNA polymerase. (1998 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01557	T265_01639	A0A075AIW2	A0A075A921	Uncharacterized protein.	DNA polymerase.	0.501
T265_01557	T265_02287	A0A075AIW2	A0A075A777	Uncharacterized protein.	Uncharacterized protein.	0.463
T265_01557	T265_08335	A0A075AIW2	A0A075A8P7	Uncharacterized protein.	ApaG domain-containing protein.	0.519
T265_01639	T265_01557	A0A075A921	A0A075AIW2	DNA polymerase.	Uncharacterized protein.	0.501
T265_01639	T265_02287	A0A075A921	A0A075A777	DNA polymerase.	Uncharacterized protein.	0.993
T265_01639	T265_02897	A0A075A921	A0A074ZUG3	DNA polymerase.	UmuC domain-containing protein.	0.920
T265_01639	T265_07576	A0A075A921	A0A074ZND0	DNA polymerase.	UmuC domain-containing protein.	0.892
T265_01639	T265_07578	A0A075A921	A0A074ZC08	DNA polymerase.	Uncharacterized protein.	0.892
T265_01639	T265_08544	A0A075A921	A0A074Z8R6	DNA polymerase.	WD_REPEATS_REGION domain-containing protein.	0.556
T265_01639	T265_09593	A0A075A921	A0A075A4E0	DNA polymerase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.964
T265_01639	T265_10775	A0A075A921	A0A074ZC27	DNA polymerase.	SprT-like domain-containing protein.	0.501
T265_01639	T265_13682	A0A075A921	A0A075AFN7	DNA polymerase.	Uncharacterized protein.	0.976
T265_01639	T265_13833	A0A075A921	A0A074ZJQ0	DNA polymerase.	DNA polymerase epsilon subunit B.	0.935
T265_02287	T265_01557	A0A075A777	A0A075AIW2	Uncharacterized protein.	Uncharacterized protein.	0.463
T265_02287	T265_01639	A0A075A777	A0A075A921	Uncharacterized protein.	DNA polymerase.	0.993
T265_02287	T265_02897	A0A075A777	A0A074ZUG3	Uncharacterized protein.	UmuC domain-containing protein.	0.970
T265_02287	T265_07576	A0A075A777	A0A074ZND0	Uncharacterized protein.	UmuC domain-containing protein.	0.963
T265_02287	T265_07578	A0A075A777	A0A074ZC08	Uncharacterized protein.	Uncharacterized protein.	0.963
T265_02287	T265_09593	A0A075A777	A0A075A4E0	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.982
T265_02287	T265_10775	A0A075A777	A0A074ZC27	Uncharacterized protein.	SprT-like domain-containing protein.	0.547