15 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_02321	Uncharacterized protein. (3063 aa)
	T265_02869	Uncharacterized protein. (905 aa)
	T265_04294	PDZ domain-containing protein. (170 aa)
	T265_05825	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (441 aa)
	T265_09557	Uncharacterized protein. (507 aa)
	T265_09797	U-box domain-containing protein. (151 aa)
	T265_02141	Uncharacterized protein. (449 aa)
	T265_14958	TPR_REGION domain-containing protein. (294 aa)
	T265_10911	Uncharacterized protein. (563 aa)
	T265_15841	Uncharacterized protein. (235 aa)
	T265_11274	Uncharacterized protein. (348 aa)
	T265_02403	Uncharacterized protein. (325 aa)
	T265_12695	LIM domain protein. (316 aa)
	T265_09254	Uncharacterized protein. (5727 aa)
	T265_01131	Uncharacterized protein. (2543 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_02141	T265_02869	A0A075AIH2	A0A074ZTG1	Uncharacterized protein.	Uncharacterized protein.	0.810
T265_02869	T265_02141	A0A074ZTG1	A0A075AIH2	Uncharacterized protein.	Uncharacterized protein.	0.810
T265_02869	T265_04294	A0A074ZTG1	A0A074ZT40	Uncharacterized protein.	PDZ domain-containing protein.	0.427
T265_02869	T265_12695	A0A074ZTG1	A0A075ABC6	Uncharacterized protein.	LIM domain protein.	0.550
T265_04294	T265_02869	A0A074ZT40	A0A074ZTG1	PDZ domain-containing protein.	Uncharacterized protein.	0.427
T265_09254	T265_15841	A0A075A5M8	A0A074YZX2	Uncharacterized protein.	Uncharacterized protein.	0.416
T265_09797	T265_14958	A0A074Z8U2	A0A074Z4I0	U-box domain-containing protein.	TPR_REGION domain-containing protein.	0.989
T265_12695	T265_02869	A0A075ABC6	A0A074ZTG1	LIM domain protein.	Uncharacterized protein.	0.550
T265_14958	T265_09797	A0A074Z4I0	A0A074Z8U2	TPR_REGION domain-containing protein.	U-box domain-containing protein.	0.989
T265_15841	T265_09254	A0A074YZX2	A0A075A5M8	Uncharacterized protein.	Uncharacterized protein.	0.416