9 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_07350	Uncharacterized protein. (171 aa)
	T265_10283	WD_REPEATS_REGION domain-containing protein. (930 aa)
	T265_09088	Uncharacterized protein. (1395 aa)
	T265_02549	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (199 aa)
	T265_01675	Uncharacterized protein. (1262 aa)
	T265_13198	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (886 aa)
	T265_09488	Uncharacterized protein. (226 aa)
	T265_13041	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (401 aa)
	T265_00717	Uncharacterized protein. (118 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00717	T265_01675	A0A075AJH7	A0A074ZXT7	Uncharacterized protein.	Uncharacterized protein.	0.923
T265_00717	T265_02549	A0A075AJH7	A0A074ZVD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.930
T265_00717	T265_10283	A0A075AJH7	A0A074Z303	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.949
T265_00717	T265_13041	A0A075AJH7	A0A075A665	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.972
T265_00717	T265_13198	A0A075AJH7	A0A075A3Z5	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.978
T265_01675	T265_00717	A0A074ZXT7	A0A075AJH7	Uncharacterized protein.	Uncharacterized protein.	0.923
T265_01675	T265_02549	A0A074ZXT7	A0A074ZVD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.895
T265_01675	T265_09088	A0A074ZXT7	A0A074ZHZ4	Uncharacterized protein.	Uncharacterized protein.	0.992
T265_01675	T265_10283	A0A074ZXT7	A0A074Z303	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
T265_01675	T265_13041	A0A074ZXT7	A0A075A665	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.998
T265_01675	T265_13198	A0A074ZXT7	A0A075A3Z5	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
T265_02549	T265_00717	A0A074ZVD3	A0A075AJH7	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.930
T265_02549	T265_01675	A0A074ZVD3	A0A074ZXT7	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.895
T265_02549	T265_09088	A0A074ZVD3	A0A074ZHZ4	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.930
T265_02549	T265_10283	A0A074ZVD3	A0A074Z303	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.998
T265_02549	T265_13041	A0A074ZVD3	A0A075A665	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.991
T265_02549	T265_13198	A0A074ZVD3	A0A075A3Z5	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.990
T265_07350	T265_10283	A0A074ZCX3	A0A074Z303	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.781
T265_09088	T265_01675	A0A074ZHZ4	A0A074ZXT7	Uncharacterized protein.	Uncharacterized protein.	0.992
T265_09088	T265_02549	A0A074ZHZ4	A0A074ZVD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.930