STRINGSTRING
T265_07350 T265_07350 T265_10283 T265_10283 T265_09088 T265_09088 T265_02549 T265_02549 T265_01675 T265_01675 T265_13198 T265_13198 T265_09488 T265_09488 T265_13041 T265_13041 T265_00717 T265_00717
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T265_07350Uncharacterized protein. (171 aa)
T265_10283WD_REPEATS_REGION domain-containing protein. (930 aa)
T265_09088Uncharacterized protein. (1395 aa)
T265_02549Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (199 aa)
T265_01675Uncharacterized protein. (1262 aa)
T265_13198Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (886 aa)
T265_09488Uncharacterized protein. (226 aa)
T265_13041WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (401 aa)
T265_00717Uncharacterized protein. (118 aa)
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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