(33 nodes) Structural constituent of chromatin network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10475	Histone domain-containing protein. (133 aa)
	T265_11051	Uncharacterized protein. (295 aa)
	T265_15522	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
	T265_03554	Histone H2B; Belongs to the histone H2B family. (122 aa)
	T265_12280	Uncharacterized protein. (98 aa)
	T265_12402	Histone H2B; Belongs to the histone H2B family. (64 aa)
	T265_04197	Histone H2A; Belongs to the histone H2A family. (125 aa)
	T265_04783	Linker histone H1 and H5 family protein. (80 aa)
	T265_05709	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (172 aa)
	T265_05828	Core histone H2A/H2B/H3/H4; Belongs to the histone H2B family. (108 aa)
	T265_01255	Histone domain-containing protein. (106 aa)
	T265_01844	Histone domain-containing protein. (287 aa)
	T265_00589	H15 domain-containing protein. (99 aa)
	T265_01084	Histone domain-containing protein. (72 aa)
	T265_13221	Histone H3; Belongs to the histone H3 family. (136 aa)
	T265_12418	Histone H2A; Belongs to the histone H2A family. (187 aa)
	T265_03551	H15 domain-containing protein. (190 aa)
	T265_03691	Uncharacterized protein. (198 aa)
	T265_05710	Uncharacterized protein. (137 aa)
	T265_12259	Uncharacterized protein. (120 aa)
	T265_03673	H15 domain-containing protein. (103 aa)
	T265_05840	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	T265_05015	Histone H2A; Belongs to the histone H2A family. (134 aa)
	T265_08152	Histone H2A; Belongs to the histone H2A family. (157 aa)
	T265_06889	Uncharacterized protein. (277 aa)
	T265_05708	Histone H2A; Belongs to the histone H2A family. (125 aa)
	T265_13914	Histone domain-containing protein. (240 aa)
	T265_09887	Histone H2A; Belongs to the histone H2A family. (99 aa)
	T265_14800	Uncharacterized protein. (495 aa)
	T265_11408	Histone H2A; Belongs to the histone H2A family. (82 aa)
	T265_09750	Histone H2A; Belongs to the histone H2A family. (225 aa)
	T265_09018	Uncharacterized protein. (87 aa)
	T265_11049	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00589	T265_01084	A0A075A599	A0A075A3Z1	H15 domain-containing protein.	Histone domain-containing protein.	0.532
T265_00589	T265_01255	A0A075A599	A0A075AAH5	H15 domain-containing protein.	Histone domain-containing protein.	0.532
T265_00589	T265_01844	A0A075A599	A0A075A8L9	H15 domain-containing protein.	Histone domain-containing protein.	0.532
T265_00589	T265_03551	A0A075A599	A0A075A308	H15 domain-containing protein.	H15 domain-containing protein.	0.430
T265_00589	T265_03554	A0A075A599	A0A074YVS2	H15 domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.667
T265_00589	T265_03691	A0A075A599	A0A074ZVA2	H15 domain-containing protein.	Uncharacterized protein.	0.508
T265_00589	T265_05709	A0A075A599	A0A075AEX9	H15 domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.688
T265_00589	T265_05710	A0A075A599	A0A074ZUZ6	H15 domain-containing protein.	Uncharacterized protein.	0.532
T265_00589	T265_05828	A0A075A599	A0A075AEU4	H15 domain-containing protein.	Core histone H2A/H2B/H3/H4; Belongs to the histone H2B family.	0.667
T265_00589	T265_05840	A0A075A599	A0A074ZML9	H15 domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.688
T265_00589	T265_09750	A0A075A599	A0A074Z8Z4	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.713
T265_00589	T265_10475	A0A075A599	A0A074Z2C8	H15 domain-containing protein.	Histone domain-containing protein.	0.532
T265_00589	T265_11049	A0A075A599	A0A074Z4F0	H15 domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.688
T265_00589	T265_11051	A0A075A599	A0A074Z0E4	H15 domain-containing protein.	Uncharacterized protein.	0.680
T265_00589	T265_12280	A0A075A599	A0A074YUF1	H15 domain-containing protein.	Uncharacterized protein.	0.641
T265_00589	T265_12402	A0A075A599	A0A074YT82	H15 domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.667
T265_00589	T265_13221	A0A075A599	A0A075A3R5	H15 domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.532
T265_00589	T265_13914	A0A075A599	A0A074ZHX7	H15 domain-containing protein.	Histone domain-containing protein.	0.532
T265_00589	T265_14800	A0A075A599	A0A074ZAX6	H15 domain-containing protein.	Uncharacterized protein.	0.508
T265_00589	T265_15522	A0A075A599	A0A074YXW8	H15 domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.688