(12 nodes) cGMP binding network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15854	Protein kinase domain-containing protein. (117 aa)
	T265_14809	Uncharacterized protein. (404 aa)
	T265_10499	Uncharacterized protein. (930 aa)
	T265_00638	Cyclic nucleotide-binding domain-containing protein. (620 aa)
	T265_02459	Uncharacterized protein. (536 aa)
	T265_13366	Cyclic nucleotide-binding domain-containing protein. (449 aa)
	T265_03949	Uncharacterized protein. (414 aa)
	T265_05536	Uncharacterized protein. (659 aa)
	T265_13800	Uncharacterized protein. (599 aa)
	T265_05537	Uncharacterized protein. (119 aa)
	T265_07474	Ion_trans domain-containing protein. (392 aa)
	T265_08731	Uncharacterized protein. (1024 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00638	T265_05536	A0A075A5F2	A0A074ZNR3	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.786
T265_00638	T265_05537	A0A075A5F2	A0A074ZJC1	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.786
T265_00638	T265_13800	A0A075A5F2	A0A074ZK54	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.786
T265_05536	T265_00638	A0A074ZNR3	A0A075A5F2	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.786
T265_05536	T265_07474	A0A074ZNR3	A0A074ZCE2	Uncharacterized protein.	Ion_trans domain-containing protein.	0.786
T265_05537	T265_00638	A0A074ZJC1	A0A075A5F2	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.786
T265_05537	T265_07474	A0A074ZJC1	A0A074ZCE2	Uncharacterized protein.	Ion_trans domain-containing protein.	0.786
T265_07474	T265_05536	A0A074ZCE2	A0A074ZNR3	Ion_trans domain-containing protein.	Uncharacterized protein.	0.786
T265_07474	T265_05537	A0A074ZCE2	A0A074ZJC1	Ion_trans domain-containing protein.	Uncharacterized protein.	0.786
T265_07474	T265_13800	A0A074ZCE2	A0A074ZK54	Ion_trans domain-containing protein.	Uncharacterized protein.	0.786
T265_13800	T265_00638	A0A074ZK54	A0A075A5F2	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.786
T265_13800	T265_07474	A0A074ZK54	A0A074ZCE2	Uncharacterized protein.	Ion_trans domain-containing protein.	0.786