(8 nodes) HOPS complex network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12347	Uncharacterized protein. (69 aa)
	T265_16175	Uncharacterized protein. (98 aa)
	T265_05785	Pep3_Vps18 domain-containing protein. (1057 aa)
	T265_13025	Uncharacterized protein. (1046 aa)
	T265_12615	WD_REPEATS_REGION domain-containing protein. (1057 aa)
	T265_00766	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family. (712 aa)
	T265_01345	CNH domain-containing protein. (1260 aa)
	T265_06404	Uncharacterized protein. (906 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00766	T265_01345	A0A075A1N3	A0A075AA98	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	CNH domain-containing protein.	0.998
T265_00766	T265_05785	A0A075A1N3	A0A074ZJC2	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	Pep3_Vps18 domain-containing protein.	0.998
T265_00766	T265_06404	A0A075A1N3	A0A075ADX7	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.949
T265_00766	T265_12347	A0A075A1N3	A0A074YTT5	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.949
T265_00766	T265_12615	A0A075A1N3	A0A075A0Y9	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	WD_REPEATS_REGION domain-containing protein.	0.997
T265_00766	T265_13025	A0A075A1N3	A0A074ZUT9	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.998
T265_01345	T265_00766	A0A075AA98	A0A075A1N3	CNH domain-containing protein.	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	0.998
T265_01345	T265_05785	A0A075AA98	A0A074ZJC2	CNH domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.997
T265_01345	T265_06404	A0A075AA98	A0A075ADX7	CNH domain-containing protein.	Uncharacterized protein.	0.953
T265_01345	T265_12347	A0A075AA98	A0A074YTT5	CNH domain-containing protein.	Uncharacterized protein.	0.953
T265_01345	T265_12615	A0A075AA98	A0A075A0Y9	CNH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.997
T265_01345	T265_13025	A0A075AA98	A0A074ZUT9	CNH domain-containing protein.	Uncharacterized protein.	0.998
T265_01345	T265_16175	A0A075AA98	A0A074YYK0	CNH domain-containing protein.	Uncharacterized protein.	0.818
T265_05785	T265_00766	A0A074ZJC2	A0A075A1N3	Pep3_Vps18 domain-containing protein.	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	0.998
T265_05785	T265_01345	A0A074ZJC2	A0A075AA98	Pep3_Vps18 domain-containing protein.	CNH domain-containing protein.	0.997
T265_05785	T265_06404	A0A074ZJC2	A0A075ADX7	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.949
T265_05785	T265_12347	A0A074ZJC2	A0A074YTT5	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.949
T265_05785	T265_12615	A0A074ZJC2	A0A075A0Y9	Pep3_Vps18 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.997
T265_05785	T265_13025	A0A074ZJC2	A0A074ZUT9	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.998
T265_05785	T265_16175	A0A074ZJC2	A0A074YYK0	Pep3_Vps18 domain-containing protein.	Uncharacterized protein.	0.954