(24 nodes) Cytoplasmic microtubule organization network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16113	Uncharacterized protein. (76 aa)
	T265_09786	Uncharacterized protein. (1827 aa)
	T265_10855	Uncharacterized protein. (307 aa)
	T265_08193	Dynactin domain-containing protein. (1409 aa)
	T265_09466	Uncharacterized protein. (1542 aa)
	T265_15105	Uncharacterized protein. (462 aa)
	T265_08194	CAP-Gly domain-containing protein. (203 aa)
	T265_14131	Uncharacterized protein. (788 aa)
	T265_06265	Gamma-tubulin complex component. (556 aa)
	T265_05005	CAP-Gly domain-containing protein. (699 aa)
	T265_05897	CKK domain-containing protein. (1253 aa)
	T265_16223	Tubulin_C domain-containing protein. (77 aa)
	T265_13426	DUF3668 domain-containing protein. (979 aa)
	T265_15777	Uncharacterized protein. (300 aa)
	T265_13884	Uncharacterized protein. (345 aa)
	T265_02486	Gamma-tubulin complex component. (1015 aa)
	T265_13681	Uncharacterized protein. (819 aa)
	T265_01206	Gamma-tubulin complex component. (918 aa)
	T265_10565	Uncharacterized protein. (298 aa)
	T265_00755	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (470 aa)
	T265_14250	Tubulin domain-containing protein; Belongs to the tubulin family. (388 aa)
	T265_07169	Uncharacterized protein. (186 aa)
	T265_13828	Uncharacterized protein. (2060 aa)
	T265_00836	Uncharacterized protein. (2076 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00755	T265_01206	A0A075A257	A0A075A069	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Gamma-tubulin complex component.	0.969
T265_00755	T265_02486	A0A075A257	A0A074ZW17	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Gamma-tubulin complex component.	0.975
T265_00755	T265_06265	A0A075A257	A0A074ZL11	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Gamma-tubulin complex component.	0.940
T265_00755	T265_09786	A0A075A257	A0A074Z4P3	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Uncharacterized protein.	0.870
T265_01206	T265_00755	A0A075A069	A0A075A257	Gamma-tubulin complex component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.969
T265_01206	T265_02486	A0A075A069	A0A074ZW17	Gamma-tubulin complex component.	Gamma-tubulin complex component.	0.999
T265_01206	T265_06265	A0A075A069	A0A074ZL11	Gamma-tubulin complex component.	Gamma-tubulin complex component.	0.987
T265_01206	T265_09786	A0A075A069	A0A074Z4P3	Gamma-tubulin complex component.	Uncharacterized protein.	0.975
T265_01206	T265_13828	A0A075A069	A0A075AF33	Gamma-tubulin complex component.	Uncharacterized protein.	0.509
T265_01206	T265_14250	A0A075A069	A0A075AC28	Gamma-tubulin complex component.	Tubulin domain-containing protein; Belongs to the tubulin family.	0.751
T265_01206	T265_16223	A0A075A069	A0A074ZSG4	Gamma-tubulin complex component.	Tubulin_C domain-containing protein.	0.969
T265_02486	T265_00755	A0A074ZW17	A0A075A257	Gamma-tubulin complex component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.975
T265_02486	T265_01206	A0A074ZW17	A0A075A069	Gamma-tubulin complex component.	Gamma-tubulin complex component.	0.999
T265_02486	T265_06265	A0A074ZW17	A0A074ZL11	Gamma-tubulin complex component.	Gamma-tubulin complex component.	0.980
T265_02486	T265_09786	A0A074ZW17	A0A074Z4P3	Gamma-tubulin complex component.	Uncharacterized protein.	0.979
T265_02486	T265_14250	A0A074ZW17	A0A075AC28	Gamma-tubulin complex component.	Tubulin domain-containing protein; Belongs to the tubulin family.	0.836
T265_02486	T265_16223	A0A074ZW17	A0A074ZSG4	Gamma-tubulin complex component.	Tubulin_C domain-containing protein.	0.970
T265_06265	T265_00755	A0A074ZL11	A0A075A257	Gamma-tubulin complex component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.940
T265_06265	T265_01206	A0A074ZL11	A0A075A069	Gamma-tubulin complex component.	Gamma-tubulin complex component.	0.987
T265_06265	T265_02486	A0A074ZL11	A0A074ZW17	Gamma-tubulin complex component.	Gamma-tubulin complex component.	0.980