20 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_09418	HORMA domain protein. (202 aa)
	T265_14481	G-patch domain-containing protein. (290 aa)
	T265_10775	SprT-like domain-containing protein. (484 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_07350	Uncharacterized protein. (171 aa)
	T265_06673	Uncharacterized protein. (485 aa)
	T265_06534	Uncharacterized protein. (1442 aa)
	T265_09410	WD_REPEATS_REGION domain-containing protein. (678 aa)
	T265_07694	ANK_REP_REGION domain-containing protein. (239 aa)
	T265_07477	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (273 aa)
	T265_13669	Uncharacterized protein. (1058 aa)
	T265_03306	Uncharacterized protein. (1502 aa)
	T265_02799	Uncharacterized protein. (4003 aa)
	T265_15604	Deacetylase sirtuin-type domain-containing protein. (466 aa)
	T265_13131	Ras-GAP domain-containing protein. (330 aa)
	T265_10549	HECT domain-containing protein. (3250 aa)
	T265_03367	Uncharacterized protein. (176 aa)
	T265_09488	Uncharacterized protein. (226 aa)
	T265_02536	Uncharacterized protein. (637 aa)
	T265_01339	UBX domain-containing protein. (562 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_02536	T265_09410	A0A075A6G9	A0A074ZH00	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.559
T265_02799	T265_10549	A0A074ZTS0	A0A075A0T8	Uncharacterized protein.	HECT domain-containing protein.	0.992
T265_03306	T265_03367	A0A074ZT24	A0A075A3G4	Uncharacterized protein.	Uncharacterized protein.	0.502
T265_03306	T265_06534	A0A074ZT24	A0A074ZG74	Uncharacterized protein.	Uncharacterized protein.	0.971
T265_03306	T265_10549	A0A074ZT24	A0A075A0T8	Uncharacterized protein.	HECT domain-containing protein.	0.519
T265_03367	T265_03306	A0A075A3G4	A0A074ZT24	Uncharacterized protein.	Uncharacterized protein.	0.502
T265_03367	T265_06534	A0A075A3G4	A0A074ZG74	Uncharacterized protein.	Uncharacterized protein.	0.703
T265_03367	T265_09410	A0A075A3G4	A0A074ZH00	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.437
T265_03367	T265_09418	A0A075A3G4	A0A074Z5W0	Uncharacterized protein.	HORMA domain protein.	0.674
T265_06534	T265_03306	A0A074ZG74	A0A074ZT24	Uncharacterized protein.	Uncharacterized protein.	0.971
T265_06534	T265_03367	A0A074ZG74	A0A075A3G4	Uncharacterized protein.	Uncharacterized protein.	0.703
T265_06534	T265_10775	A0A074ZG74	A0A074ZC27	Uncharacterized protein.	SprT-like domain-containing protein.	0.631
T265_09410	T265_02536	A0A074ZH00	A0A075A6G9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.559
T265_09410	T265_03367	A0A074ZH00	A0A075A3G4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.437
T265_09410	T265_09418	A0A074ZH00	A0A074Z5W0	WD_REPEATS_REGION domain-containing protein.	HORMA domain protein.	0.999
T265_09410	T265_10549	A0A074ZH00	A0A075A0T8	WD_REPEATS_REGION domain-containing protein.	HECT domain-containing protein.	0.449
T265_09418	T265_03367	A0A074Z5W0	A0A075A3G4	HORMA domain protein.	Uncharacterized protein.	0.674
T265_09418	T265_09410	A0A074Z5W0	A0A074ZH00	HORMA domain protein.	WD_REPEATS_REGION domain-containing protein.	0.999
T265_10549	T265_02799	A0A075A0T8	A0A074ZTS0	HECT domain-containing protein.	Uncharacterized protein.	0.992
T265_10549	T265_03306	A0A075A0T8	A0A074ZT24	HECT domain-containing protein.	Uncharacterized protein.	0.519