59 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16176	Uncharacterized protein. (87 aa)
	T265_16200	Vault domain-containing protein. (74 aa)
	T265_16139	Uncharacterized protein. (41 aa)
	T265_16026	Uncharacterized protein. (101 aa)
	T265_10980	Uncharacterized protein. (1014 aa)
	T265_16295	MVP_shoulder domain-containing protein. (63 aa)
	T265_09418	HORMA domain protein. (202 aa)
	T265_10535	FCP1 homology domain-containing protein. (724 aa)
	T265_09198	Uncharacterized protein. (907 aa)
	T265_09079	Uncharacterized protein. (676 aa)
	T265_09086	Uncharacterized protein. (583 aa)
	T265_11444	Uncharacterized protein. (287 aa)
	T265_14481	G-patch domain-containing protein. (290 aa)
	T265_09197	Uncharacterized protein. (897 aa)
	T265_15276	Uncharacterized protein. (123 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_06958	FHA domain protein. (422 aa)
	T265_08126	Protein kinase domain-containing protein. (961 aa)
	T265_06160	Tyrosine-protein phosphatase domain-containing protein. (213 aa)
	T265_09224	Uncharacterized protein; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family. (155 aa)
	T265_06040	Uncharacterized protein. (502 aa)
	T265_13894	Diacylglycerol kinase. (1360 aa)
	T265_04374	Cyclic nucleotide-binding domain-containing protein. (49 aa)
	T265_07019	Uncharacterized protein. (157 aa)
	T265_16303	Uncharacterized protein. (101 aa)
	T265_03110	SB domain-containing protein. (578 aa)
	T265_02799	Uncharacterized protein. (4003 aa)
	T265_13334	Uncharacterized protein. (687 aa)
	T265_15604	Deacetylase sirtuin-type domain-containing protein. (466 aa)
	T265_05447	Uncharacterized protein. (542 aa)
	T265_11553	Uncharacterized protein. (466 aa)
	T265_01519	Diacylglycerol kinase. (1321 aa)
	T265_12859	Cyclic nucleotide-binding domain-containing protein. (739 aa)
	T265_13011	Uncharacterized protein. (652 aa)
	T265_04373	Cyclic nucleotide-binding domain-containing protein. (195 aa)
	T265_02041	Uncharacterized protein. (1310 aa)
	T265_00812	Cyclic nucleotide-binding domain protein. (376 aa)
	T265_10549	HECT domain-containing protein. (3250 aa)
	T265_12681	Elp3 domain-containing protein. (370 aa)
	T265_12543	Uncharacterized protein. (206 aa)
	T265_13311	C2 NT-type domain-containing protein. (701 aa)
	T265_00500	Uncharacterized protein. (258 aa)
	T265_00449	Uncharacterized protein. (135 aa)
	T265_01351	Uncharacterized protein; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family. (159 aa)
	T265_03367	Uncharacterized protein. (176 aa)
	T265_00584	Uncharacterized protein. (150 aa)
	T265_02528	RWD domain protein. (329 aa)
	T265_02536	Uncharacterized protein. (637 aa)
	T265_00733	Uncharacterized protein. (464 aa)
	T265_12544	Uncharacterized protein. (69 aa)
	T265_05919	PWWP domain-containing protein. (1407 aa)
	T265_04369	Uncharacterized protein. (785 aa)
	T265_13499	Cyclic nucleotide-binding domain-containing protein. (279 aa)
	T265_02580	Uncharacterized protein. (94 aa)
	T265_13018	Non-specific serine/threonine protein kinase. (751 aa)
	T265_02377	Uncharacterized protein. (439 aa)
	T265_01339	UBX domain-containing protein. (562 aa)
	T265_01099	Uncharacterized protein. (596 aa)
	T265_12640	Cyclic nucleotide-binding domain protein. (380 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00584	T265_16176	A0A075A595	A0A074YTZ2	Uncharacterized protein.	Uncharacterized protein.	0.440
T265_00584	T265_16295	A0A075A595	A0A074Z472	Uncharacterized protein.	MVP_shoulder domain-containing protein.	0.529
T265_00584	T265_16303	A0A075A595	A0A074ZRZ8	Uncharacterized protein.	Uncharacterized protein.	0.519
T265_01099	T265_14481	A0A075AJA0	A0A074ZAJ5	Uncharacterized protein.	G-patch domain-containing protein.	0.555
T265_01339	T265_02041	A0A075AJ27	A0A075A0P3	UBX domain-containing protein.	Uncharacterized protein.	0.525
T265_01351	T265_08126	A0A075A371	A0A074ZEP4	Uncharacterized protein; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	Protein kinase domain-containing protein.	0.905
T265_01519	T265_13894	A0A074ZYC7	A0A074ZMG4	Diacylglycerol kinase.	Diacylglycerol kinase.	0.908
T265_02041	T265_01339	A0A075A0P3	A0A075AJ27	Uncharacterized protein.	UBX domain-containing protein.	0.525
T265_02041	T265_05919	A0A075A0P3	A0A075AEP8	Uncharacterized protein.	PWWP domain-containing protein.	0.804
T265_02041	T265_10980	A0A075A0P3	A0A074Z0K1	Uncharacterized protein.	Uncharacterized protein.	0.416
T265_02799	T265_10549	A0A074ZTS0	A0A075A0T8	Uncharacterized protein.	HECT domain-containing protein.	0.992
T265_03367	T265_09418	A0A075A3G4	A0A074Z5W0	Uncharacterized protein.	HORMA domain protein.	0.674
T265_05447	T265_10549	A0A074ZW19	A0A075A0T8	Uncharacterized protein.	HECT domain-containing protein.	0.548
T265_05919	T265_02041	A0A075AEP8	A0A075A0P3	PWWP domain-containing protein.	Uncharacterized protein.	0.804
T265_08126	T265_01351	A0A074ZEP4	A0A075A371	Protein kinase domain-containing protein.	Uncharacterized protein; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	0.905
T265_08126	T265_09224	A0A074ZEP4	A0A074ZHL8	Protein kinase domain-containing protein.	Uncharacterized protein; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	0.880
T265_09079	T265_13011	A0A074Z6T7	A0A074ZZ51	Uncharacterized protein.	Uncharacterized protein.	0.540
T265_09086	T265_13011	A0A074Z740	A0A074ZZ51	Uncharacterized protein.	Uncharacterized protein.	0.540
T265_09224	T265_08126	A0A074ZHL8	A0A074ZEP4	Uncharacterized protein; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	Protein kinase domain-containing protein.	0.880
T265_09418	T265_03367	A0A074Z5W0	A0A075A3G4	HORMA domain protein.	Uncharacterized protein.	0.674