(10 nodes) Carboxy-terminal domain protein kinase complex network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_00138	Helicase ATP-binding domain-containing protein. (846 aa)
	T265_16022	Uncharacterized protein. (193 aa)
	T265_10272	Uncharacterized protein; Belongs to the cyclin family. (620 aa)
	T265_07453	Uncharacterized protein. (253 aa)
	T265_06756	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (547 aa)
	T265_06498	Uncharacterized protein. (825 aa)
	T265_03710	Cyclin_C domain-containing protein; Belongs to the cyclin family. (218 aa)
	T265_15386	MAT1 domain-containing protein. (1203 aa)
	T265_09760	Protein kinase domain-containing protein. (888 aa)
	T265_00261	Uncharacterized protein. (931 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00138	T265_00261	A0A075A7E3	A0A075AJW4	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.999
T265_00138	T265_06498	A0A075A7E3	A0A074ZG93	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.999
T265_00138	T265_06756	A0A075A7E3	A0A074ZFD8	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
T265_00138	T265_07453	A0A075A7E3	A0A074ZCI3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.969
T265_00138	T265_09760	A0A075A7E3	A0A075A3S3	Helicase ATP-binding domain-containing protein.	Protein kinase domain-containing protein.	0.697
T265_00138	T265_10272	A0A075A7E3	A0A074Z749	Helicase ATP-binding domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.510
T265_00138	T265_15386	A0A075A7E3	A0A074ZY80	Helicase ATP-binding domain-containing protein.	MAT1 domain-containing protein.	0.999
T265_00261	T265_00138	A0A075AJW4	A0A075A7E3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
T265_00261	T265_06498	A0A075AJW4	A0A074ZG93	Uncharacterized protein.	Uncharacterized protein.	0.999
T265_00261	T265_06756	A0A075AJW4	A0A074ZFD8	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
T265_00261	T265_07453	A0A075AJW4	A0A074ZCI3	Uncharacterized protein.	Uncharacterized protein.	0.985
T265_00261	T265_09760	A0A075AJW4	A0A075A3S3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.729
T265_00261	T265_15386	A0A075AJW4	A0A074ZY80	Uncharacterized protein.	MAT1 domain-containing protein.	0.998
T265_03710	T265_06756	A0A074ZV43	A0A074ZFD8	Cyclin_C domain-containing protein; Belongs to the cyclin family.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.694
T265_03710	T265_09760	A0A074ZV43	A0A075A3S3	Cyclin_C domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.999
T265_03710	T265_10272	A0A074ZV43	A0A074Z749	Cyclin_C domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.609
T265_03710	T265_15386	A0A074ZV43	A0A074ZY80	Cyclin_C domain-containing protein; Belongs to the cyclin family.	MAT1 domain-containing protein.	0.741
T265_03710	T265_16022	A0A074ZV43	A0A074Z594	Cyclin_C domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.609
T265_06498	T265_00138	A0A074ZG93	A0A075A7E3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.999
T265_06498	T265_00261	A0A074ZG93	A0A075AJW4	Uncharacterized protein.	Uncharacterized protein.	0.999