53 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_13724	Uncharacterized protein. (189 aa)
	T265_01360	Aspartate aminotransferase. (411 aa)
	T265_02270	Uncharacterized protein. (231 aa)
	T265_09169	C2 domain protein. (75 aa)
	T265_00529	Uncharacterized protein. (921 aa)
	T265_12527	WD_REPEATS_REGION domain-containing protein. (695 aa)
	T265_01234	Uncharacterized protein. (393 aa)
	T265_13267	Uncharacterized protein. (434 aa)
	T265_13276	Uncharacterized protein. (1630 aa)
	T265_03633	Uncharacterized protein. (713 aa)
	T265_00368	Uncharacterized protein. (375 aa)
	T265_01757	LNS2 domain-containing protein. (407 aa)
	T265_12667	Uncharacterized protein. (219 aa)
	T265_01233	Uncharacterized protein. (211 aa)
	T265_02630	AA_TRNA_LIGASE_II domain-containing protein. (1171 aa)
	T265_02940	PH domain-containing protein. (597 aa)
	T265_03022	Guanylate cyclase. (1336 aa)
	T265_01910	WD_REPEATS_REGION domain-containing protein. (1034 aa)
	T265_13732	NR LBD domain-containing protein. (516 aa)
	T265_15765	Nuclear receptor domain-containing protein. (199 aa)
	T265_04181	Uncharacterized protein. (479 aa)
	T265_03584	Uncharacterized protein. (861 aa)
	T265_03480	Nuclear receptor domain-containing protein. (905 aa)
	T265_05152	Uncharacterized protein. (154 aa)
	T265_13831	Uncharacterized protein. (1186 aa)
	T265_14779	Uncharacterized protein. (138 aa)
	T265_07202	Uncharacterized protein. (1229 aa)
	T265_08938	Uncharacterized protein. (1153 aa)
	T265_07815	Guanylate cyclase. (1252 aa)
	T265_07882	Uncharacterized protein. (618 aa)
	T265_08024	Uncharacterized protein. (1286 aa)
	T265_08225	BZIP domain-containing protein. (216 aa)
	T265_09171	Uncharacterized protein. (974 aa)
	T265_14840	Uncharacterized protein. (737 aa)
	T265_10935	Uncharacterized protein. (2749 aa)
	T265_15640	Uncharacterized protein. (63 aa)
	T265_15987	TMF_TATA_bd domain-containing protein. (103 aa)
	T265_15966	tRNA-synt_1c_C domain-containing protein. (90 aa)
	T265_16072	Uncharacterized protein. (70 aa)
	T265_05309	Phosphoenolpyruvate carboxykinase. (636 aa)
	T265_06196	Uncharacterized protein. (1567 aa)
	T265_04423	Uncharacterized protein. (942 aa)
	T265_07299	Uncharacterized protein. (106 aa)
	T265_13696	Receptor protein-tyrosine kinase. (2126 aa)
	T265_13669	Uncharacterized protein. (1058 aa)
	T265_06781	Uncharacterized protein. (381 aa)
	T265_06717	Kinase domain protein; Belongs to the protein kinase superfamily. (497 aa)
	T265_12785	Uncharacterized protein. (1022 aa)
	T265_01653	Uncharacterized protein. (418 aa)
	T265_12939	Uncharacterized protein. (300 aa)
	T265_02269	Uncharacterized protein. (570 aa)
	T265_13018	Non-specific serine/threonine protein kinase. (751 aa)
	T265_00908	Guanylate cyclase. (722 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00368	T265_02940	A0A075A2I5	A0A074ZXP4	Uncharacterized protein.	PH domain-containing protein.	0.721
T265_00529	T265_01653	A0A075A5Q8	A0A075AIU0	Uncharacterized protein.	Uncharacterized protein.	0.646
T265_00529	T265_02940	A0A075A5Q8	A0A074ZXP4	Uncharacterized protein.	PH domain-containing protein.	0.997
T265_00529	T265_03480	A0A075A5Q8	A0A074ZRE9	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.616
T265_00529	T265_06196	A0A075A5Q8	A0A074ZL87	Uncharacterized protein.	Uncharacterized protein.	0.705
T265_00529	T265_06717	A0A075A5Q8	A0A074ZRD6	Uncharacterized protein.	Kinase domain protein; Belongs to the protein kinase superfamily.	0.998
T265_00529	T265_07299	A0A075A5Q8	A0A074ZPF7	Uncharacterized protein.	Uncharacterized protein.	0.558
T265_00529	T265_12939	A0A075A5Q8	A0A075AIH8	Uncharacterized protein.	Uncharacterized protein.	0.646
T265_00529	T265_13018	A0A075A5Q8	A0A075AIA4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.747
T265_00529	T265_13267	A0A075A5Q8	A0A075A345	Uncharacterized protein.	Uncharacterized protein.	0.616
T265_00529	T265_15640	A0A075A5Q8	A0A074YWY8	Uncharacterized protein.	Uncharacterized protein.	0.705
T265_00908	T265_02940	A0A075ABM7	A0A074ZXP4	Guanylate cyclase.	PH domain-containing protein.	0.596
T265_00908	T265_06196	A0A075ABM7	A0A074ZL87	Guanylate cyclase.	Uncharacterized protein.	0.479
T265_00908	T265_06717	A0A075ABM7	A0A074ZRD6	Guanylate cyclase.	Kinase domain protein; Belongs to the protein kinase superfamily.	0.485
T265_00908	T265_15640	A0A075ABM7	A0A074YWY8	Guanylate cyclase.	Uncharacterized protein.	0.479
T265_01360	T265_05309	A0A075AAB3	A0A074ZKX7	Aspartate aminotransferase.	Phosphoenolpyruvate carboxykinase.	0.826
T265_01360	T265_07882	A0A075AAB3	A0A074ZAX5	Aspartate aminotransferase.	Uncharacterized protein.	0.826
T265_01653	T265_00529	A0A075AIU0	A0A075A5Q8	Uncharacterized protein.	Uncharacterized protein.	0.646
T265_01653	T265_04181	A0A075AIU0	A0A074ZTC3	Uncharacterized protein.	Uncharacterized protein.	0.505
T265_01757	T265_08024	A0A075A1M5	A0A074ZAH7	LNS2 domain-containing protein.	Uncharacterized protein.	0.912