(5 nodes) Histone H2A monoubiquitination network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_07774	Uncharacterized protein. (1466 aa)
	T265_05717	RING-type domain-containing protein. (378 aa)
	T265_12753	Uncharacterized protein. (211 aa)
	T265_04067	RING-type domain-containing protein. (260 aa)
	T265_12754	RING-type domain-containing protein. (244 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_04067	T265_05717	A0A075A1A2	A0A074ZIP9	RING-type domain-containing protein.	RING-type domain-containing protein.	0.652
T265_04067	T265_12753	A0A075A1A2	A0A074ZZA4	RING-type domain-containing protein.	Uncharacterized protein.	0.876
T265_04067	T265_12754	A0A075A1A2	A0A075AJ51	RING-type domain-containing protein.	RING-type domain-containing protein.	0.876
T265_05717	T265_04067	A0A074ZIP9	A0A075A1A2	RING-type domain-containing protein.	RING-type domain-containing protein.	0.652
T265_05717	T265_12753	A0A074ZIP9	A0A074ZZA4	RING-type domain-containing protein.	Uncharacterized protein.	0.964
T265_05717	T265_12754	A0A074ZIP9	A0A075AJ51	RING-type domain-containing protein.	RING-type domain-containing protein.	0.964
T265_12753	T265_04067	A0A074ZZA4	A0A075A1A2	Uncharacterized protein.	RING-type domain-containing protein.	0.876
T265_12753	T265_05717	A0A074ZZA4	A0A074ZIP9	Uncharacterized protein.	RING-type domain-containing protein.	0.964
T265_12753	T265_12754	A0A074ZZA4	A0A075AJ51	Uncharacterized protein.	RING-type domain-containing protein.	0.424
T265_12754	T265_04067	A0A075AJ51	A0A075A1A2	RING-type domain-containing protein.	RING-type domain-containing protein.	0.876
T265_12754	T265_05717	A0A075AJ51	A0A074ZIP9	RING-type domain-containing protein.	RING-type domain-containing protein.	0.964
T265_12754	T265_12753	A0A075AJ51	A0A074ZZA4	RING-type domain-containing protein.	Uncharacterized protein.	0.424