(30 nodes) Retrograde transport, endosome to Golgi network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16066	Uncharacterized protein. (75 aa)
	T265_11940	Uncharacterized protein. (882 aa)
	T265_15435	RIC1 domain-containing protein. (1174 aa)
	T265_15426	Uncharacterized protein. (817 aa)
	T265_10049	Uncharacterized protein. (196 aa)
	T265_12343	Uncharacterized protein. (105 aa)
	T265_14866	Uncharacterized protein. (1075 aa)
	T265_14669	Uncharacterized protein. (1023 aa)
	T265_09155	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (357 aa)
	T265_10909	UBIQUITIN_CONJUGAT_2 domain-containing protein. (1138 aa)
	T265_08778	BTB domain-containing protein. (462 aa)
	T265_07275	Uncharacterized protein. (202 aa)
	T265_08361	Uncharacterized protein. (518 aa)
	T265_10132	Reverse transcriptase domain-containing protein. (659 aa)
	T265_06939	Uncharacterized protein. (1148 aa)
	T265_06764	PX domain-containing protein. (641 aa)
	T265_05763	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (979 aa)
	T265_07962	Uncharacterized protein. (232 aa)
	T265_03981	t-SNARE coiled-coil homology domain-containing protein. (253 aa)
	T265_07116	PH domain protein. (255 aa)
	T265_04160	PX domain-containing protein. (177 aa)
	T265_03775	PX domain-containing protein. (471 aa)
	T265_02082	Uncharacterized protein. (1091 aa)
	T265_02798	C2H2-type domain-containing protein. (556 aa)
	T265_01225	Uncharacterized protein. (515 aa)
	T265_13390	Uncharacterized protein. (452 aa)
	T265_15145	Uncharacterized protein. (329 aa)
	T265_00837	Uncharacterized protein. (2600 aa)
	T265_03540	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (283 aa)
	T265_00332	Uncharacterized protein. (1442 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01225	T265_02082	A0A075A079	A0A074ZWA1	Uncharacterized protein.	Uncharacterized protein.	0.736
T265_01225	T265_03540	A0A075A079	A0A075AHI7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.682
T265_01225	T265_03981	A0A075A079	A0A074ZPR4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.653
T265_01225	T265_06939	A0A075A079	A0A074ZER0	Uncharacterized protein.	Uncharacterized protein.	0.726
T265_01225	T265_07275	A0A075A079	A0A074ZDI9	Uncharacterized protein.	Uncharacterized protein.	0.664
T265_01225	T265_10049	A0A075A079	A0A074Z3S2	Uncharacterized protein.	Uncharacterized protein.	0.657
T265_01225	T265_10132	A0A075A079	A0A074ZEC1	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.896
T265_01225	T265_12343	A0A075A079	A0A074Z4J5	Uncharacterized protein.	Uncharacterized protein.	0.557
T265_01225	T265_14866	A0A075A079	A0A074Z5N4	Uncharacterized protein.	Uncharacterized protein.	0.557
T265_01225	T265_15145	A0A075A079	A0A075A1H1	Uncharacterized protein.	Uncharacterized protein.	0.850
T265_01225	T265_15426	A0A075A079	A0A074YZ42	Uncharacterized protein.	Uncharacterized protein.	0.744
T265_01225	T265_15435	A0A075A079	A0A074YZ08	Uncharacterized protein.	RIC1 domain-containing protein.	0.896
T265_02082	T265_01225	A0A074ZWA1	A0A075A079	Uncharacterized protein.	Uncharacterized protein.	0.736
T265_02082	T265_03540	A0A074ZWA1	A0A075AHI7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.874
T265_02082	T265_03981	A0A074ZWA1	A0A074ZPR4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.898
T265_02082	T265_05763	A0A074ZWA1	A0A074ZJL4	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.473
T265_02082	T265_06939	A0A074ZWA1	A0A074ZER0	Uncharacterized protein.	Uncharacterized protein.	0.996
T265_02082	T265_07275	A0A074ZWA1	A0A074ZDI9	Uncharacterized protein.	Uncharacterized protein.	0.783
T265_02082	T265_09155	A0A074ZWA1	A0A074ZB70	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.510
T265_02082	T265_10049	A0A074ZWA1	A0A074Z3S2	Uncharacterized protein.	Uncharacterized protein.	0.821