98 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15901	Uncharacterized protein. (105 aa)
	T265_15588	Uncharacterized protein. (784 aa)
	T265_11658	CUB domain-containing protein. (1227 aa)
	T265_15831	Molybdopterin domain-containing protein. (123 aa)
	T265_15328	Cyclic nucleotide-binding domain-containing protein. (741 aa)
	T265_11735	Stork_head domain-containing protein. (632 aa)
	T265_15008	FHA domain-containing protein. (796 aa)
	T265_14956	Uncharacterized protein. (438 aa)
	T265_14932	Uncharacterized protein. (1600 aa)
	T265_09531	Ion_trans_N domain-containing protein. (196 aa)
	T265_15692	Uncharacterized protein. (79 aa)
	T265_14724	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (727 aa)
	T265_10173	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (627 aa)
	T265_08858	Uncharacterized protein. (882 aa)
	T265_09795	HCO3_cotransp domain-containing protein. (297 aa)
	T265_08541	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (467 aa)
	T265_08425	Uncharacterized protein. (1067 aa)
	T265_15327	Cyclic nucleotide-binding domain-containing protein. (504 aa)
	T265_07873	Piezo-type mechanosensitive ion channel component. (3481 aa)
	T265_08966	Uncharacterized protein. (353 aa)
	T265_07609	Uncharacterized protein. (141 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_14323	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (573 aa)
	T265_07611	Cyclic nucleotide-binding domain-containing protein. (941 aa)
	T265_08284	PHB domain-containing protein. (243 aa)
	T265_06998	Uncharacterized protein. (1007 aa)
	T265_14191	Uncharacterized protein. (294 aa)
	T265_06953	Cyclic nucleotide-binding domain-containing protein. (1011 aa)
	T265_14157	Uncharacterized protein. (528 aa)
	T265_14957	Uncharacterized protein. (234 aa)
	T265_14875	Ion_trans domain-containing protein. (188 aa)
	T265_06210	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (558 aa)
	T265_13973	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (221 aa)
	T265_14723	Uncharacterized protein. (425 aa)
	T265_07025	Uncharacterized protein. (96 aa)
	T265_06904	LITAF domain-containing protein. (203 aa)
	T265_06813	Neurotransmitter-gated ion-channel ligand binding domain protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (472 aa)
	T265_13862	Ion channel. (250 aa)
	T265_13786	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (701 aa)
	T265_06211	Uncharacterized protein. (641 aa)
	T265_06225	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (491 aa)
	T265_13588	PDZ domain-containing protein. (553 aa)
	T265_14364	Uncharacterized protein. (843 aa)
	T265_05667	Uncharacterized protein. (648 aa)
	T265_05541	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (655 aa)
	T265_04393	Uncharacterized protein. (1531 aa)
	T265_06995	Uncharacterized protein. (313 aa)
	T265_03886	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (710 aa)
	T265_04399	Uncharacterized protein. (353 aa)
	T265_13211	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (475 aa)
	T265_06223	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (503 aa)
	T265_13190	Uncharacterized protein. (241 aa)
	T265_02910	Protein kinase domain-containing protein. (429 aa)
	T265_13118	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (619 aa)
	T265_13120	Cyclic nucleotide-binding domain-containing protein. (1164 aa)
	T265_13422	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (616 aa)
	T265_02868	PBPe domain-containing protein. (481 aa)
	T265_13334	Uncharacterized protein. (687 aa)
	T265_13838	Neur_chan_LBD domain-containing protein. (817 aa)
	T265_13064	PRELI/MSF1 domain-containing protein. (172 aa)
	T265_15691	Uncharacterized protein. (155 aa)
	T265_12012	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (174 aa)
	T265_13009	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (776 aa)
	T265_02217	Uncharacterized protein. (318 aa)
	T265_11481	Cyclic nucleotide-binding domain-containing protein. (901 aa)
	T265_13679	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (705 aa)
	T265_02911	Protein kinase domain-containing protein. (624 aa)
	T265_12805	Uncharacterized protein. (864 aa)
	T265_15326	Uncharacterized protein. (208 aa)
	T265_12769	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (199 aa)
	T265_02453	Uncharacterized protein. (230 aa)
	T265_12799	Ion_trans domain-containing protein. (103 aa)
	T265_02332	SOCS box domain-containing protein. (440 aa)
	T265_04392	Uncharacterized protein. (824 aa)
	T265_04128	Uncharacterized protein. (770 aa)
	T265_13335	SOUL heme-binding protein. (182 aa)
	T265_01461	Ion_trans_N domain-containing protein. (290 aa)
	T265_13311	C2 NT-type domain-containing protein. (701 aa)
	T265_15006	Uncharacterized protein. (1108 aa)
	T265_01338	Uncharacterized protein. (338 aa)
	T265_09796	Uncharacterized protein. (71 aa)
	T265_03214	Uncharacterized protein. (586 aa)
	T265_09530	Cyclic nucleotide-binding domain-containing protein. (301 aa)
	T265_03054	Apoptosis regulator protein, Bcl-2 family. (199 aa)
	T265_09100	Uncharacterized protein. (292 aa)
	T265_08421	Uncharacterized protein. (997 aa)
	T265_08254	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (627 aa)
	T265_01460	Cyclic nucleotide-binding domain-containing protein. (425 aa)
	T265_01494	Uncharacterized protein. (276 aa)
	T265_00439	Cyclic nucleotide-binding domain-containing protein. (467 aa)
	T265_00071	DNA-binding protein SATB. (1410 aa)
	T265_05792	Uncharacterized protein. (84 aa)
	T265_05648	Uncharacterized protein. (788 aa)
	T265_13414	Uncharacterized protein. (1381 aa)
	T265_03796	Uncharacterized protein. (464 aa)
	T265_02796	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (310 aa)
	T265_12538	Ion_trans domain-containing protein. (443 aa)
	T265_00386	Uncharacterized protein. (560 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00439	T265_12538	A0A075ACR5	A0A075AJP8	Cyclic nucleotide-binding domain-containing protein.	Ion_trans domain-containing protein.	0.904
T265_00439	T265_15326	A0A075ACR5	A0A074ZYW1	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.695
T265_01338	T265_05541	A0A075A362	A0A074ZNS2	Uncharacterized protein.	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.505
T265_01338	T265_13786	A0A075A362	A0A074ZK71	Uncharacterized protein.	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.419
T265_01460	T265_12799	A0A075A9H8	A0A074ZZ97	Cyclic nucleotide-binding domain-containing protein.	Ion_trans domain-containing protein.	0.733
T265_01460	T265_14875	A0A075A9H8	A0A074ZGI1	Cyclic nucleotide-binding domain-containing protein.	Ion_trans domain-containing protein.	0.897
T265_02796	T265_05541	A0A075AI20	A0A074ZNS2	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.407
T265_02868	T265_06904	A0A074ZUE0	A0A074ZIT7	PBPe domain-containing protein.	LITAF domain-containing protein.	0.833
T265_02868	T265_08421	A0A074ZUE0	A0A075A8H0	PBPe domain-containing protein.	Uncharacterized protein.	0.833
T265_02910	T265_02911	A0A074ZTD3	A0A074ZXM0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.900
T265_02911	T265_02910	A0A074ZXM0	A0A074ZTD3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.900
T265_03054	T265_13334	A0A075A4S7	A0A074ZUR7	Apoptosis regulator protein, Bcl-2 family.	Uncharacterized protein.	0.703
T265_03214	T265_05648	A0A075A464	A0A075AF04	Uncharacterized protein.	Uncharacterized protein.	0.554
T265_03886	T265_13190	A0A074ZQU3	A0A074ZTC9	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.464
T265_03886	T265_14364	A0A074ZQU3	A0A074ZMX7	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.438
T265_05541	T265_01338	A0A074ZNS2	A0A075A362	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Uncharacterized protein.	0.505
T265_05541	T265_02796	A0A074ZNS2	A0A075AI20	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.407
T265_05541	T265_05792	A0A074ZNS2	A0A075AEV3	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Uncharacterized protein.	0.505
T265_05541	T265_10173	A0A074ZNS2	A0A074Z7G8	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.505
T265_05541	T265_12769	A0A074ZNS2	A0A074ZYZ8	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	0.505