68 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_04726	BOP1NT domain-containing protein. (2089 aa)
	T265_12214	Uncharacterized protein. (41 aa)
	T265_11653	Uncharacterized protein. (403 aa)
	T265_15429	Plug_translocon domain-containing protein. (500 aa)
	T265_11083	Uncharacterized protein. (227 aa)
	T265_15252	Uncharacterized protein. (312 aa)
	T265_11319	Uncharacterized protein. (908 aa)
	T265_10130	MRG domain-containing protein. (1461 aa)
	T265_05076	WD_REPEATS_REGION domain-containing protein. (335 aa)
	T265_01015	WD_REPEATS_REGION domain-containing protein. (345 aa)
	T265_01108	Uncharacterized protein. (613 aa)
	T265_08339	Reverse transcriptase domain-containing protein. (1674 aa)
	T265_02528	RWD domain protein. (329 aa)
	T265_09002	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (225 aa)
	T265_00451	Uncharacterized protein. (966 aa)
	T265_09249	WW domain-containing protein. (469 aa)
	T265_02955	Uncharacterized protein. (373 aa)
	T265_09876	Tr-type G domain-containing protein. (1469 aa)
	T265_09909	eIF-5a domain-containing protein. (192 aa)
	T265_01012	Uncharacterized protein. (371 aa)
	T265_01075	Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (259 aa)
	T265_12865	Uncharacterized protein. (351 aa)
	T265_15431	Uncharacterized protein. (606 aa)
	T265_13136	PHD-type domain-containing protein. (133 aa)
	T265_13288	Uncharacterized protein. (905 aa)
	T265_12355	Uncharacterized protein. (72 aa)
	T265_16151	Uncharacterized protein. (94 aa)
	T265_09598	RRM domain-containing protein. (239 aa)
	T265_14797	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (603 aa)
	T265_14772	RING-type domain-containing protein. (2249 aa)
	T265_10187	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (712 aa)
	T265_08648	SUI1 domain-containing protein. (120 aa)
	T265_14913	Uncharacterized protein. (254 aa)
	T265_15339	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1295 aa)
	T265_11007	Tr-type G domain-containing protein. (720 aa)
	T265_14200	eIF2A domain-containing protein. (501 aa)
	SRP54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (518 aa)
	T265_06314	RRM domain-containing protein. (731 aa)
	T265_05779	60s Acidic ribosomal protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	T265_14150	Uncharacterized protein. (331 aa)
	T265_05848	Uncharacterized protein. (285 aa)
	T265_08521	Uncharacterized protein. (2085 aa)
	T265_06154	Uncharacterized protein. (148 aa)
	T265_15651	Uncharacterized protein. (982 aa)
	T265_13824	J domain-containing protein. (524 aa)
	T265_05766	Uncharacterized protein. (273 aa)
	T265_12092	Uncharacterized protein. (540 aa)
	T265_03934	TOG domain-containing protein. (2826 aa)
	T265_03124	S1 motif domain-containing protein. (329 aa)
	T265_03194	Uncharacterized protein. (748 aa)
	T265_02963	Uncharacterized protein. (856 aa)
	T265_12290	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (229 aa)
	T265_16108	Uncharacterized protein. (162 aa)
	T265_04973	WD_REPEATS_REGION domain-containing protein. (315 aa)
	T265_03929	RRM domain-containing protein. (1002 aa)
	T265_03968	Hflx-type G domain-containing protein. (614 aa)
	T265_13370	Uncharacterized protein. (124 aa)
	T265_05415	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (607 aa)
	T265_13921	Tr-type G domain-containing protein. (574 aa)
	T265_04766	SRP54 domain-containing protein. (803 aa)
	T265_04430	Uncharacterized protein. (233 aa)
	T265_00224	G domain-containing protein. (958 aa)
	T265_01387	Reverse transcriptase domain-containing protein. (1365 aa)
	T265_13255	Uncharacterized protein. (293 aa)
	T265_00431	Uncharacterized protein. (183 aa)
	T265_06555	Uncharacterized protein. (924 aa)
	T265_05545	Uncharacterized protein. (937 aa)
	T265_04405	Uncharacterized protein. (577 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SRP54	T265_03194	A0A074ZG59	A0A074ZTA6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.999
SRP54	T265_04430	A0A074ZG59	A0A074ZN48	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.523
SRP54	T265_04766	A0A074ZG59	A0A074ZMN6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	SRP54 domain-containing protein.	0.997
SRP54	T265_04973	A0A074ZG59	A0A074ZQP6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.823
SRP54	T265_09909	A0A074ZG59	A0A075A398	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	eIF-5a domain-containing protein.	0.498
SRP54	T265_10187	A0A074ZG59	A0A074Z7D9	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.516
SRP54	T265_11007	A0A074ZG59	A0A074ZB37	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Tr-type G domain-containing protein.	0.573
SRP54	T265_11083	A0A074ZG59	A0A074YZY3	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.582
SRP54	T265_11653	A0A074ZG59	A0A074YXW1	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.584
SRP54	T265_12290	A0A074ZG59	A0A074ZSY6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.767
SRP54	T265_12355	A0A074ZG59	A0A074Z4G7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.523
SRP54	T265_13921	A0A074ZG59	A0A074ZM55	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Tr-type G domain-containing protein.	0.495
SRP54	T265_15339	A0A074ZG59	A0A074ZAT5	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.582
SRP54	T265_15429	A0A074ZG59	A0A074YZ28	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Plug_translocon domain-containing protein.	0.767
T265_00224	T265_03968	A0A075AJV4	A0A074ZPQ1	G domain-containing protein.	Hflx-type G domain-containing protein.	0.669
T265_00224	T265_09909	A0A075AJV4	A0A075A398	G domain-containing protein.	eIF-5a domain-containing protein.	0.541
T265_00224	T265_10130	A0A075AJV4	A0A074Z3J0	G domain-containing protein.	MRG domain-containing protein.	0.963
T265_00224	T265_11007	A0A075AJV4	A0A074ZB37	G domain-containing protein.	Tr-type G domain-containing protein.	0.579
T265_00224	T265_11653	A0A075AJV4	A0A074YXW1	G domain-containing protein.	Uncharacterized protein.	0.410
T265_00224	T265_13255	A0A075AJV4	A0A075AHL2	G domain-containing protein.	Uncharacterized protein.	0.457