17 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10556	UVR domain-containing protein. (931 aa)
	T265_09802	Lipoyl-binding domain-containing protein. (118 aa)
	T265_10380	AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (987 aa)
	T265_09838	Folate_rec domain-containing protein. (265 aa)
	T265_13768	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (858 aa)
	T265_13385	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (597 aa)
	T265_04348	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1009 aa)
	T265_06214	Uncharacterized protein. (1588 aa)
	T265_13383	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (521 aa)
	T265_03456	AA_TRNA_LIGASE_II_ALA domain-containing protein. (1344 aa)
	T265_03322	Uncharacterized protein. (608 aa)
	T265_00853	Uncharacterized protein. (489 aa)
	T265_13254	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2824 aa)
	T265_09803	Uncharacterized protein. (237 aa)
	T265_08279	P4Hc domain-containing protein. (672 aa)
	T265_07179	Fe2OG dioxygenase domain-containing protein. (460 aa)
	T265_01562	Tetratricopeptide repeat protein. (595 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01562	T265_06214	A0A075AIW3	A0A074ZT65	Tetratricopeptide repeat protein.	Uncharacterized protein.	0.542
T265_01562	T265_07179	A0A075AIW3	A0A075ACC6	Tetratricopeptide repeat protein.	Fe2OG dioxygenase domain-containing protein.	0.440
T265_03456	T265_10380	A0A074ZW29	A0A074Z6S6	AA_TRNA_LIGASE_II_ALA domain-containing protein.	AA_TRNA_LIGASE_II_ALA domain-containing protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.	0.914
T265_04348	T265_09802	A0A074ZSR7	A0A074Z4L3	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Lipoyl-binding domain-containing protein.	0.701
T265_04348	T265_09803	A0A074ZSR7	A0A075A3N4	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Uncharacterized protein.	0.701
T265_04348	T265_13383	A0A074ZSR7	A0A074ZU30	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.989
T265_04348	T265_13385	A0A074ZSR7	A0A074ZPK0	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.989
T265_04348	T265_13768	A0A074ZSR7	A0A074ZKP5	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.989
T265_06214	T265_01562	A0A074ZT65	A0A075AIW3	Uncharacterized protein.	Tetratricopeptide repeat protein.	0.542
T265_07179	T265_01562	A0A075ACC6	A0A075AIW3	Fe2OG dioxygenase domain-containing protein.	Tetratricopeptide repeat protein.	0.440
T265_09802	T265_04348	A0A074Z4L3	A0A074ZSR7	Lipoyl-binding domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.701
T265_09802	T265_09803	A0A074Z4L3	A0A075A3N4	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.411
T265_09802	T265_13383	A0A074Z4L3	A0A074ZU30	Lipoyl-binding domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.567
T265_09802	T265_13385	A0A074Z4L3	A0A074ZPK0	Lipoyl-binding domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.567
T265_09802	T265_13768	A0A074Z4L3	A0A074ZKP5	Lipoyl-binding domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.567
T265_09803	T265_04348	A0A075A3N4	A0A074ZSR7	Uncharacterized protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.701
T265_09803	T265_09802	A0A075A3N4	A0A074Z4L3	Uncharacterized protein.	Lipoyl-binding domain-containing protein.	0.411
T265_09803	T265_13383	A0A075A3N4	A0A074ZU30	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.567
T265_09803	T265_13385	A0A075A3N4	A0A074ZPK0	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.567
T265_09803	T265_13768	A0A075A3N4	A0A074ZKP5	Uncharacterized protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.567