133 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_12870	Protein kinase domain-containing protein. (1848 aa)
	T265_12681	Elp3 domain-containing protein. (370 aa)
	T265_00812	Cyclic nucleotide-binding domain protein. (376 aa)
	T265_04245	MATH domain protein. (546 aa)
	T265_04373	Cyclic nucleotide-binding domain-containing protein. (195 aa)
	T265_01050	Uncharacterized protein. (989 aa)
	T265_04554	Protein tyrosine kinase. (688 aa)
	T265_13011	Uncharacterized protein. (652 aa)
	T265_12859	Cyclic nucleotide-binding domain-containing protein. (739 aa)
	T265_01519	Diacylglycerol kinase. (1321 aa)
	T265_15386	MAT1 domain-containing protein. (1203 aa)
	T265_03022	Guanylate cyclase. (1336 aa)
	T265_11553	Uncharacterized protein. (466 aa)
	T265_01930	Uncharacterized protein. (216 aa)
	T265_02025	WD_REPEATS_REGION domain-containing protein. (1238 aa)
	T265_15518	Uncharacterized protein. (355 aa)
	T265_02401	Protein kinase domain-containing protein. (2254 aa)
	T265_02140	Protein kinase domain-containing protein. (688 aa)
	T265_03710	Cyclin_C domain-containing protein; Belongs to the cyclin family. (218 aa)
	T265_13320	Uncharacterized protein. (202 aa)
	T265_03934	TOG domain-containing protein. (2826 aa)
	T265_02613	Uncharacterized protein. (341 aa)
	T265_03110	SB domain-containing protein. (578 aa)
	T265_03290	Uncharacterized protein. (808 aa)
	T265_16303	Uncharacterized protein. (101 aa)
	T265_14076	Protein kinase domain-containing protein. (506 aa)
	T265_14075	Eph LBD domain-containing protein. (334 aa)
	T265_14074	Protein kinase domain-containing protein. (950 aa)
	T265_03438	Uncharacterized protein. (121 aa)
	T265_06717	Kinase domain protein; Belongs to the protein kinase superfamily. (497 aa)
	T265_14124	Cyclin N-terminal domain-containing protein. (640 aa)
	T265_04885	Protein kinase domain-containing protein. (1005 aa)
	T265_13669	Uncharacterized protein. (1058 aa)
	T265_07019	Uncharacterized protein. (157 aa)
	T265_13696	Receptor protein-tyrosine kinase. (2126 aa)
	T265_07170	Uncharacterized protein. (1217 aa)
	T265_04374	Cyclic nucleotide-binding domain-containing protein. (49 aa)
	T265_05439	Uncharacterized protein. (245 aa)
	T265_04198	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (410 aa)
	T265_07421	Uncharacterized protein. (167 aa)
	T265_13461	Uncharacterized protein; Belongs to the cyclin family. (595 aa)
	T265_07694	ANK_REP_REGION domain-containing protein. (239 aa)
	T265_14381	Uncharacterized protein. (1442 aa)
	T265_13894	Diacylglycerol kinase. (1360 aa)
	T265_06196	Uncharacterized protein. (1567 aa)
	T265_05152	Uncharacterized protein. (154 aa)
	T265_05531	Uncharacterized protein. (1855 aa)
	T265_13813	Protein kinase domain-containing protein. (695 aa)
	T265_08521	Uncharacterized protein. (2085 aa)
	T265_05779	60s Acidic ribosomal protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	T265_14001	Uncharacterized protein. (688 aa)
	T265_14901	Uncharacterized protein. (136 aa)
	T265_14078	Eph LBD domain-containing protein. (308 aa)
	T265_14407	Uncharacterized protein. (1114 aa)
	T265_06606	Uncharacterized protein. (237 aa)
	T265_06750	LisH domain-containing protein. (262 aa)
	T265_10045	Uncharacterized protein. (1312 aa)
	T265_06900	Targeting protein. (220 aa)
	T265_16176	Uncharacterized protein. (87 aa)
	T265_16200	Vault domain-containing protein. (74 aa)
	T265_16139	Uncharacterized protein. (41 aa)
	T265_16026	Uncharacterized protein. (101 aa)
	T265_15925	Uncharacterized protein. (93 aa)
	T265_12214	Uncharacterized protein. (41 aa)
	T265_15640	Uncharacterized protein. (63 aa)
	T265_11926	PIPK domain-containing protein. (518 aa)
	T265_15467	Uncharacterized protein. (194 aa)
	T265_11179	Uncharacterized protein. (1106 aa)
	T265_10657	Uncharacterized protein. (564 aa)
	T265_11735	Stork_head domain-containing protein. (632 aa)
	T265_11684	Uncharacterized protein. (446 aa)
	T265_15477	MH2 domain-containing protein. (339 aa)
	T265_15081	Uncharacterized protein. (1204 aa)
	T265_16295	MVP_shoulder domain-containing protein. (63 aa)
	T265_00506	Uncharacterized protein. (1405 aa)
	T265_12640	Cyclic nucleotide-binding domain protein. (380 aa)
	T265_12757	Uncharacterized protein. (154 aa)
	T265_02419	WD_REPEATS_REGION domain-containing protein. (2272 aa)
	T265_02377	Uncharacterized protein. (439 aa)
	T265_03081	Uncharacterized protein. (1257 aa)
	T265_03314	CYCLIN domain-containing protein; Belongs to the cyclin family. (796 aa)
	T265_13321	Uncharacterized protein. (751 aa)
	T265_03772	Uncharacterized protein. (2837 aa)
	T265_13499	Cyclic nucleotide-binding domain-containing protein. (279 aa)
	T265_04369	Uncharacterized protein. (785 aa)
	T265_04495	Ku domain-containing protein. (974 aa)
	T265_13536	Uncharacterized protein. (736 aa)
	T265_04823	Protein kinase domain-containing protein. (1040 aa)
	T265_13646	Uncharacterized protein. (714 aa)
	T265_05289	Uncharacterized protein. (913 aa)
	T265_05464	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (128 aa)
	T265_13359	Uncharacterized protein. (958 aa)
	T265_12667	Uncharacterized protein. (219 aa)
	T265_00874	Uncharacterized protein. (448 aa)
	T265_10437	Cyclin domain protein; Belongs to the cyclin family. (476 aa)
	T265_04027	SMAP domain-containing protein. (321 aa)
	T265_09735	Uncharacterized protein. (1120 aa)
	T265_16022	Uncharacterized protein. (193 aa)
	T265_09474	Uncharacterized protein. (142 aa)
	T265_09198	Uncharacterized protein. (907 aa)
	T265_10272	Uncharacterized protein; Belongs to the cyclin family. (620 aa)
	T265_08599	Uncharacterized protein. (1188 aa)
	T265_11444	Uncharacterized protein. (287 aa)
	T265_14538	Fibronectin type-III domain-containing protein. (711 aa)
	T265_14858	Protein kinase domain-containing protein. (759 aa)
	T265_11178	Uncharacterized protein. (143 aa)
	T265_07915	Uncharacterized protein. (1195 aa)
	T265_09197	Uncharacterized protein. (897 aa)
	T265_07815	Guanylate cyclase. (1252 aa)
	T265_08938	Uncharacterized protein. (1153 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_07579	Uncharacterized protein. (442 aa)
	T265_07012	Uncharacterized protein. (590 aa)
	T265_00185	Uncharacterized protein. (2063 aa)
	T265_07141	DBF4-type domain-containing protein. (1194 aa)
	T265_00763	Uncharacterized protein. (535 aa)
	T265_00733	Uncharacterized protein. (464 aa)
	T265_00908	Guanylate cyclase. (722 aa)
	T265_07922	Receptor protein-tyrosine kinase. (1658 aa)
	T265_02032	Uncharacterized protein. (569 aa)
	T265_08636	Uncharacterized protein. (2062 aa)
	T265_00049	Uncharacterized protein. (234 aa)
	T265_12465	Uncharacterized protein. (331 aa)
	T265_00584	Uncharacterized protein. (150 aa)
	T265_00163	Uncharacterized protein. (2365 aa)
	T265_12522	Uncharacterized protein. (66 aa)
	T265_09914	Cyclin N-terminal domain-containing protein. (351 aa)
	T265_10074	F5/8 type C domain-containing protein. (1024 aa)
	T265_00500	Uncharacterized protein. (258 aa)
	T265_13337	Uncharacterized protein. (1193 aa)
	T265_03790	Uncharacterized protein. (1181 aa)
	T265_16151	Uncharacterized protein. (94 aa)
	T265_00062	F5/8 type C domain-containing protein. (1288 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00062	T265_07579	A0A075AJY6	A0A074ZCF8	F5/8 type C domain-containing protein.	Uncharacterized protein.	0.420
T265_00163	T265_02025	A0A075A3S2	A0A074ZWF8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.584
T265_00163	T265_02032	A0A075A3S2	A0A075A7Y7	Uncharacterized protein.	Uncharacterized protein.	0.568
T265_00163	T265_03314	A0A075A3S2	A0A075AHP9	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.578
T265_00163	T265_03934	A0A075A3S2	A0A074ZUE4	Uncharacterized protein.	TOG domain-containing protein.	0.496
T265_00163	T265_04198	A0A075A3S2	A0A074ZNZ1	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.578
T265_00163	T265_07019	A0A075A3S2	A0A074ZQF1	Uncharacterized protein.	Uncharacterized protein.	0.475
T265_00163	T265_13461	A0A075A3S2	A0A074ZNV4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.578
T265_00163	T265_13646	A0A075A3S2	A0A075AFW4	Uncharacterized protein.	Uncharacterized protein.	0.895
T265_00163	T265_14124	A0A075A3S2	A0A074ZR81	Uncharacterized protein.	Cyclin N-terminal domain-containing protein.	0.568
T265_00185	T265_02025	A0A075AD27	A0A074ZWF8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.847
T265_00185	T265_02419	A0A075AD27	A0A075AIC0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.477
T265_00185	T265_04823	A0A075AD27	A0A075AG16	Uncharacterized protein.	Protein kinase domain-containing protein.	0.434
T265_00185	T265_08636	A0A075AD27	A0A075A7M1	Uncharacterized protein.	Uncharacterized protein.	0.559
T265_00185	T265_12465	A0A075AD27	A0A075A6H6	Uncharacterized protein.	Uncharacterized protein.	0.603
T265_00185	T265_14001	A0A075AD27	A0A074ZGL0	Uncharacterized protein.	Uncharacterized protein.	0.603
T265_00185	T265_15925	A0A075AD27	A0A074YV50	Uncharacterized protein.	Uncharacterized protein.	0.434
T265_00506	T265_06196	A0A075AJL9	A0A074ZL87	Uncharacterized protein.	Uncharacterized protein.	0.520
T265_00506	T265_13011	A0A075AJL9	A0A074ZZ51	Uncharacterized protein.	Uncharacterized protein.	0.488
T265_00506	T265_13813	A0A075AJL9	A0A074ZK18	Uncharacterized protein.	Protein kinase domain-containing protein.	0.412