(13 nodes) Phagocytic vesicle network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_11288	Rho-GAP domain-containing protein. (1174 aa)
	T265_09562	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (290 aa)
	T265_15041	Uncharacterized protein. (182 aa)
	T265_09699	Uncharacterized protein. (230 aa)
	T265_14520	Uncharacterized protein. (301 aa)
	T265_04832	Reverse transcriptase domain-containing protein. (626 aa)
	T265_11868	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (312 aa)
	T265_02025	WD_REPEATS_REGION domain-containing protein. (1238 aa)
	T265_03302	Phosphatidylinositol 3-kinase catalytic subunit type 3. (992 aa)
	T265_02940	PH domain-containing protein. (597 aa)
	T265_12666	Uncharacterized protein. (332 aa)
	T265_00936	Uncharacterized protein. (303 aa)
	T265_00868	Uncharacterized protein. (157 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_02025	T265_03302	A0A074ZWF8	A0A074ZWI7	WD_REPEATS_REGION domain-containing protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.836
T265_02940	T265_03302	A0A074ZXP4	A0A074ZWI7	PH domain-containing protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.404
T265_02940	T265_04832	A0A074ZXP4	A0A074ZMI4	PH domain-containing protein.	Reverse transcriptase domain-containing protein.	0.818
T265_02940	T265_09699	A0A074ZXP4	A0A074ZFW2	PH domain-containing protein.	Uncharacterized protein.	0.818
T265_02940	T265_11288	A0A074ZXP4	A0A074YZ68	PH domain-containing protein.	Rho-GAP domain-containing protein.	0.614
T265_02940	T265_12666	A0A074ZXP4	A0A075A1K0	PH domain-containing protein.	Uncharacterized protein.	0.492
T265_02940	T265_15041	A0A074ZXP4	A0A074ZEN4	PH domain-containing protein.	Uncharacterized protein.	0.403
T265_03302	T265_02025	A0A074ZWI7	A0A074ZWF8	Phosphatidylinositol 3-kinase catalytic subunit type 3.	WD_REPEATS_REGION domain-containing protein.	0.836
T265_03302	T265_02940	A0A074ZWI7	A0A074ZXP4	Phosphatidylinositol 3-kinase catalytic subunit type 3.	PH domain-containing protein.	0.404
T265_04832	T265_02940	A0A074ZMI4	A0A074ZXP4	Reverse transcriptase domain-containing protein.	PH domain-containing protein.	0.818
T265_04832	T265_12666	A0A074ZMI4	A0A075A1K0	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.491
T265_04832	T265_15041	A0A074ZMI4	A0A074ZEN4	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.579
T265_09562	T265_11288	A0A074Z9S0	A0A074YZ68	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Rho-GAP domain-containing protein.	0.900
T265_09562	T265_11868	A0A074Z9S0	A0A074ZVW5	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.916
T265_09699	T265_02940	A0A074ZFW2	A0A074ZXP4	Uncharacterized protein.	PH domain-containing protein.	0.818
T265_09699	T265_12666	A0A074ZFW2	A0A075A1K0	Uncharacterized protein.	Uncharacterized protein.	0.463
T265_09699	T265_15041	A0A074ZFW2	A0A074ZEN4	Uncharacterized protein.	Uncharacterized protein.	0.581
T265_11288	T265_02940	A0A074YZ68	A0A074ZXP4	Rho-GAP domain-containing protein.	PH domain-containing protein.	0.614
T265_11288	T265_09562	A0A074YZ68	A0A074Z9S0	Rho-GAP domain-containing protein.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
T265_11288	T265_11868	A0A074YZ68	A0A074ZVW5	Rho-GAP domain-containing protein.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900