17 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_00070	Uncharacterized protein. (177 aa)
	T265_04041	Uncharacterized protein. (381 aa)
	T265_15099	WD_REPEATS_REGION domain-containing protein. (635 aa)
	T265_14035	WD_REPEATS_REGION domain-containing protein. (188 aa)
	T265_14856	Uncharacterized protein. (770 aa)
	T265_09040	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (579 aa)
	T265_10733	Axonemal dynein light intermediate polypeptide 1 family protein. (256 aa)
	T265_14018	Uncharacterized protein. (186 aa)
	T265_07583	Reverse transcriptase domain-containing protein. (1295 aa)
	T265_02269	Uncharacterized protein. (570 aa)
	T265_00243	WD_REPEATS_REGION domain-containing protein. (992 aa)
	T265_00392	Uncharacterized protein. (493 aa)
	T265_03187	WD_REPEATS_REGION domain-containing protein. (567 aa)
	T265_02270	Uncharacterized protein. (231 aa)
	T265_12490	Uncharacterized protein. (1055 aa)
	T265_03205	WD_REPEATS_REGION domain-containing protein. (769 aa)
	T265_12527	WD_REPEATS_REGION domain-containing protein. (695 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00070	T265_04041	A0A075A3H4	A0A075AH24	Uncharacterized protein.	Uncharacterized protein.	0.459
T265_00243	T265_04041	A0A075AJV9	A0A075AH24	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.604
T265_00243	T265_07583	A0A075AJV9	A0A075AB62	WD_REPEATS_REGION domain-containing protein.	Reverse transcriptase domain-containing protein.	0.532
T265_00243	T265_09040	A0A075AJV9	A0A074Z6Y2	WD_REPEATS_REGION domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.560
T265_00243	T265_14856	A0A075AJV9	A0A074Z5P0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.560
T265_00392	T265_04041	A0A075A6H2	A0A075AH24	Uncharacterized protein.	Uncharacterized protein.	0.936
T265_00392	T265_09040	A0A075A6H2	A0A074Z6Y2	Uncharacterized protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.560
T265_00392	T265_12490	A0A075A6H2	A0A075A6P8	Uncharacterized protein.	Uncharacterized protein.	0.978
T265_00392	T265_14856	A0A075A6H2	A0A074Z5P0	Uncharacterized protein.	Uncharacterized protein.	0.560
T265_02269	T265_02270	A0A075AIE6	A0A075A757	Uncharacterized protein.	Uncharacterized protein.	0.538
T265_02269	T265_03187	A0A075AIE6	A0A075AHR5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.520
T265_02269	T265_04041	A0A075AIE6	A0A075AH24	Uncharacterized protein.	Uncharacterized protein.	0.604
T265_02269	T265_09040	A0A075AIE6	A0A074Z6Y2	Uncharacterized protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.560
T265_02269	T265_14856	A0A075AIE6	A0A074Z5P0	Uncharacterized protein.	Uncharacterized protein.	0.560
T265_02270	T265_02269	A0A075A757	A0A075AIE6	Uncharacterized protein.	Uncharacterized protein.	0.538
T265_02270	T265_03187	A0A075A757	A0A075AHR5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.514
T265_02270	T265_04041	A0A075A757	A0A075AH24	Uncharacterized protein.	Uncharacterized protein.	0.604
T265_02270	T265_09040	A0A075A757	A0A074Z6Y2	Uncharacterized protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.560
T265_02270	T265_14856	A0A075A757	A0A074Z5P0	Uncharacterized protein.	Uncharacterized protein.	0.560
T265_03187	T265_02269	A0A075AHR5	A0A075AIE6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.520