(7 nodes) Glycerophospholipid catabolic process network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_05003	GP-PDE domain-containing protein. (473 aa)
	T265_14041	GP-PDE domain-containing protein. (534 aa)
	T265_15889	GP-PDE domain-containing protein. (208 aa)
	T265_02264	GP-PDE domain-containing protein. (927 aa)
	T265_11407	Uncharacterized protein. (293 aa)
	T265_13484	Hydrolase_4 domain-containing protein. (334 aa)
	T265_05000	Uncharacterized protein. (228 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_02264	T265_14041	A0A074ZVJ2	A0A074ZSE3	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.920
T265_05000	T265_05003	A0A075AFU4	A0A074ZM06	Uncharacterized protein.	GP-PDE domain-containing protein.	0.906
T265_05000	T265_15889	A0A075AFU4	A0A074ZU23	Uncharacterized protein.	GP-PDE domain-containing protein.	0.937
T265_05003	T265_05000	A0A074ZM06	A0A075AFU4	GP-PDE domain-containing protein.	Uncharacterized protein.	0.906
T265_05003	T265_15889	A0A074ZM06	A0A074ZU23	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.908
T265_11407	T265_13484	A0A074ZXK0	A0A075A076	Uncharacterized protein.	Hydrolase_4 domain-containing protein.	0.518
T265_13484	T265_11407	A0A075A076	A0A074ZXK0	Hydrolase_4 domain-containing protein.	Uncharacterized protein.	0.518
T265_14041	T265_02264	A0A074ZSE3	A0A074ZVJ2	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.920
T265_15889	T265_05000	A0A074ZU23	A0A075AFU4	GP-PDE domain-containing protein.	Uncharacterized protein.	0.937
T265_15889	T265_05003	A0A074ZU23	A0A074ZM06	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.908