8 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_13996	ABC transmembrane type-1 domain-containing protein. (480 aa)
	T265_08330	Uncharacterized protein. (440 aa)
	T265_08332	Uncharacterized protein. (813 aa)
	T265_06068	Uncharacterized protein. (475 aa)
	T265_04591	Zinc finger, C2H2 type. (373 aa)
	T265_13386	Peptidase C83 domain-containing protein. (546 aa)
	T265_13669	Uncharacterized protein. (1058 aa)
	T265_01797	Glutathione synthetase. (442 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01797	T265_13386	A0A074ZY53	A0A074ZPK4	Glutathione synthetase.	Peptidase C83 domain-containing protein.	0.491
T265_06068	T265_13386	A0A074ZIA6	A0A074ZPK4	Uncharacterized protein.	Peptidase C83 domain-containing protein.	0.484
T265_06068	T265_13996	A0A074ZIA6	A0A075AE29	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.910
T265_13386	T265_01797	A0A074ZPK4	A0A074ZY53	Peptidase C83 domain-containing protein.	Glutathione synthetase.	0.491
T265_13386	T265_06068	A0A074ZPK4	A0A074ZIA6	Peptidase C83 domain-containing protein.	Uncharacterized protein.	0.484
T265_13996	T265_06068	A0A075AE29	A0A074ZIA6	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.910