(18 nodes) Regulation of synaptic plasticity network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15812	Uncharacterized protein. (49 aa)
	T265_11141	PH domain-containing protein. (240 aa)
	T265_11151	Uncharacterized protein. (306 aa)
	T265_08612	PDZ domain-containing protein. (376 aa)
	T265_14724	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (727 aa)
	T265_16009	Uncharacterized protein. (172 aa)
	T265_15356	Ras-GEF domain-containing protein. (626 aa)
	T265_10856	Uncharacterized protein. (573 aa)
	T265_11133	DH domain-containing protein. (434 aa)
	T265_15358	PH domain-containing protein. (169 aa)
	T265_15355	N-terminal Ras-GEF domain-containing protein. (1173 aa)
	T265_13171	Uncharacterized protein. (439 aa)
	T265_03134	Uncharacterized protein. (2115 aa)
	T265_08431	BSD domain-containing protein. (367 aa)
	T265_14723	Uncharacterized protein. (425 aa)
	T265_13414	Uncharacterized protein. (1381 aa)
	T265_07174	Uncharacterized protein. (483 aa)
	T265_04546	Uncharacterized protein. (301 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_03134	T265_13414	A0A074ZSJ8	A0A075AH13	Uncharacterized protein.	Uncharacterized protein.	0.914
T265_11133	T265_15356	A0A074Z028	A0A074Z437	DH domain-containing protein.	Ras-GEF domain-containing protein.	0.788
T265_11133	T265_15358	A0A074Z028	A0A074YZR7	DH domain-containing protein.	PH domain-containing protein.	0.444
T265_13171	T265_13414	A0A074ZWV2	A0A075AH13	Uncharacterized protein.	Uncharacterized protein.	0.914
T265_13414	T265_03134	A0A075AH13	A0A074ZSJ8	Uncharacterized protein.	Uncharacterized protein.	0.914
T265_13414	T265_13171	A0A075AH13	A0A074ZWV2	Uncharacterized protein.	Uncharacterized protein.	0.914
T265_14723	T265_14724	A0A074ZI80	A0A074Z757	Uncharacterized protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.920
T265_14724	T265_14723	A0A074Z757	A0A074ZI80	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.920
T265_15355	T265_15356	A0A074YZQ9	A0A074Z437	N-terminal Ras-GEF domain-containing protein.	Ras-GEF domain-containing protein.	0.461
T265_15356	T265_11133	A0A074Z437	A0A074Z028	Ras-GEF domain-containing protein.	DH domain-containing protein.	0.788
T265_15356	T265_15355	A0A074Z437	A0A074YZQ9	Ras-GEF domain-containing protein.	N-terminal Ras-GEF domain-containing protein.	0.461
T265_15358	T265_11133	A0A074YZR7	A0A074Z028	PH domain-containing protein.	DH domain-containing protein.	0.444