(125 nodes) Golgi vesicle transport network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16115	GOLD domain-containing protein. (175 aa)
	T265_15547	Uncharacterized protein. (204 aa)
	T265_16023	Adaptin_N domain-containing protein. (73 aa)
	T265_00332	Uncharacterized protein. (1442 aa)
	T265_00717	Uncharacterized protein. (118 aa)
	T265_00795	CASP_C domain-containing protein. (824 aa)
	T265_01697	Cytochrome c domain-containing protein. (264 aa)
	T265_02770	Uncharacterized protein. (496 aa)
	T265_02903	Uncharacterized protein; Belongs to the synaptobrevin family. (198 aa)
	T265_13321	Uncharacterized protein. (751 aa)
	T265_03772	Uncharacterized protein. (2837 aa)
	T265_04166	Reverse transcriptase domain-containing protein. (529 aa)
	T265_05355	Uncharacterized protein. (694 aa)
	T265_05603	GOLD domain-containing protein. (247 aa)
	T265_06000	Uncharacterized protein. (662 aa)
	T265_05985	Uncharacterized protein. (511 aa)
	T265_06212	ER lumen protein-retaining receptor. (450 aa)
	T265_13977	ANK_REP_REGION domain-containing protein. (187 aa)
	T265_12442	Uncharacterized protein. (1660 aa)
	T265_06860	C-CAP/cofactor C-like domain-containing protein. (283 aa)
	T265_00294	Uncharacterized protein. (382 aa)
	T265_07311	Uncharacterized protein. (257 aa)
	T265_12657	Uncharacterized protein. (201 aa)
	T265_01775	Sec8_exocyst domain-containing protein. (1294 aa)
	T265_02175	Uncharacterized protein. (300 aa)
	T265_08759	Uncharacterized protein. (299 aa)
	T265_13041	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (401 aa)
	T265_12553	GOLD domain-containing protein. (69 aa)
	T265_00559	Uncharacterized protein. (206 aa)
	T265_02668	Legume-like lectin family protein. (315 aa)
	T265_02831	Uncharacterized protein. (304 aa)
	T265_09488	Uncharacterized protein. (226 aa)
	T265_13198	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (886 aa)
	T265_09732	Uncharacterized protein. (960 aa)
	T265_01176	Uncharacterized protein. (953 aa)
	T265_00357	GRIP domain-containing protein. (1220 aa)
	T265_03852	GOLD domain-containing protein. (577 aa)
	T265_12666	Uncharacterized protein. (332 aa)
	T265_10381	WD_REPEATS_REGION domain-containing protein. (1388 aa)
	T265_15145	Uncharacterized protein. (329 aa)
	T265_00828	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (853 aa)
	T265_00774	Uncharacterized protein. (350 aa)
	T265_12736	Uncharacterized protein. (135 aa)
	T265_01535	Uncharacterized protein. (1142 aa)
	T265_11211	Uncharacterized protein. (302 aa)
	T265_04834	Uncharacterized protein. (3171 aa)
	T265_02769	Uncharacterized protein. (867 aa)
	T265_13075	Uncharacterized protein. (1021 aa)
	T265_04910	Uncharacterized protein. (540 aa)
	T265_02798	C2H2-type domain-containing protein. (556 aa)
	T265_01675	Uncharacterized protein. (1262 aa)
	T265_02028	Protein YIPF. (200 aa)
	T265_11776	Uncharacterized protein. (154 aa)
	T265_02372	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (191 aa)
	T265_02549	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (199 aa)
	T265_13320	Uncharacterized protein. (202 aa)
	T265_02742	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (1007 aa)
	T265_04011	Uncharacterized protein. (75 aa)
	T265_02728	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (554 aa)
	T265_04160	PX domain-containing protein. (177 aa)
	T265_04434	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (983 aa)
	T265_13509	Uncharacterized protein. (933 aa)
	T265_03347	Uncharacterized protein. (665 aa)
	T265_03374	t-SNARE coiled-coil homology domain-containing protein. (102 aa)
	T265_03438	Uncharacterized protein. (121 aa)
	T265_03904	SSD domain-containing protein. (1605 aa)
	T265_06995	Uncharacterized protein. (313 aa)
	T265_13342	Uncharacterized protein. (1117 aa)
	T265_03948	Protein kinase domain-containing protein. (1395 aa)
	T265_03981	t-SNARE coiled-coil homology domain-containing protein. (253 aa)
	T265_04257	t-SNARE coiled-coil homology domain-containing protein. (410 aa)
	T265_07262	Cullin family protein; Belongs to the cullin family. (822 aa)
	T265_04176	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1203 aa)
	T265_07635	Uncharacterized protein. (244 aa)
	T265_14354	Uncharacterized protein. (140 aa)
	T265_04836	Uncharacterized protein. (440 aa)
	T265_05983	Uncharacterized protein. (402 aa)
	T265_04688	Uncharacterized protein. (640 aa)
	T265_14444	Uncharacterized protein. (215 aa)
	T265_13687	Uncharacterized protein. (294 aa)
	T265_08277	Uncharacterized protein. (1733 aa)
	T265_06466	Uncharacterized protein; Belongs to the synaptobrevin family. (214 aa)
	T265_05626	Reverse transcriptase domain-containing protein. (982 aa)
	T265_09088	Uncharacterized protein. (1395 aa)
	T265_06148	Phosphoprotein 3. (284 aa)
	T265_07463	Dopey_N domain-containing protein. (2847 aa)
	T265_06566	Uncharacterized protein. (292 aa)
	T265_06764	PX domain-containing protein. (641 aa)
	T265_06919	Arf-GAP domain-containing protein. (184 aa)
	T265_06939	Uncharacterized protein. (1148 aa)
	T265_08406	Uncharacterized protein. (559 aa)
	T265_14567	Cog4 domain-containing protein. (1228 aa)
	T265_08482	Dor1-like family protein. (694 aa)
	T265_07275	Uncharacterized protein. (202 aa)
	T265_10456	BZIP domain-containing protein. (699 aa)
	T265_07350	Uncharacterized protein. (171 aa)
	T265_08778	BTB domain-containing protein. (462 aa)
	T265_07663	t-SNARE coiled-coil homology domain-containing protein. (324 aa)
	T265_07584	Uncharacterized protein. (1222 aa)
	T265_10993	Uncharacterized protein. (718 aa)
	T265_08375	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (236 aa)
	T265_08515	Uncharacterized protein. (846 aa)
	T265_09759	Uncharacterized protein. (494 aa)
	T265_08615	Sec16_C domain-containing protein. (1743 aa)
	T265_15546	Transmembrane adaptor Erv26. (204 aa)
	T265_08815	Uncharacterized protein. (1166 aa)
	T265_08836	Uncharacterized protein. (240 aa)
	T265_14669	Uncharacterized protein. (1023 aa)
	T265_08823	PH domain-containing protein. (795 aa)
	T265_14829	J domain-containing protein. (424 aa)
	T265_14866	Uncharacterized protein. (1075 aa)
	T265_12343	Uncharacterized protein. (105 aa)
	T265_09958	Uncharacterized protein. (263 aa)
	T265_10049	Uncharacterized protein. (196 aa)
	T265_10237	GAE domain-containing protein. (1397 aa)
	T265_10283	WD_REPEATS_REGION domain-containing protein. (930 aa)
	T265_10297	Uncharacterized protein. (916 aa)
	T265_15146	Uncharacterized protein. (311 aa)
	T265_11844	Uncharacterized protein. (154 aa)
	T265_15239	VPS10 domain-containing protein. (685 aa)
	T265_10810	Uncharacterized protein. (484 aa)
	T265_15299	ER lumen protein-retaining receptor. (171 aa)
	T265_15426	Uncharacterized protein. (817 aa)
	T265_11465	Uncharacterized protein. (792 aa)
	T265_11373	Bromo domain-containing protein. (2070 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00294	T265_02028	A0A075ACU9	A0A074ZXI3	Uncharacterized protein.	Protein YIPF.	0.417
T265_00294	T265_03981	A0A075ACU9	A0A074ZPR4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.562
T265_00294	T265_04011	A0A075ACU9	A0A074ZU42	Uncharacterized protein.	Uncharacterized protein.	0.634
T265_00294	T265_04166	A0A075ACU9	A0A075AGX6	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.539
T265_00294	T265_06764	A0A075ACU9	A0A074ZEW9	Uncharacterized protein.	PX domain-containing protein.	0.524
T265_00294	T265_10049	A0A075ACU9	A0A074Z3S2	Uncharacterized protein.	Uncharacterized protein.	0.522
T265_00294	T265_13041	A0A075ACU9	A0A075A665	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.496
T265_00332	T265_00717	A0A075AJS4	A0A075AJH7	Uncharacterized protein.	Uncharacterized protein.	0.580
T265_00332	T265_00828	A0A075AJS4	A0A075A0U8	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.550
T265_00332	T265_01675	A0A075AJS4	A0A074ZXT7	Uncharacterized protein.	Uncharacterized protein.	0.722
T265_00332	T265_02372	A0A075AJS4	A0A074ZW22	Uncharacterized protein.	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.996
T265_00332	T265_02549	A0A075AJS4	A0A074ZVD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.522
T265_00332	T265_04011	A0A075AJS4	A0A074ZU42	Uncharacterized protein.	Uncharacterized protein.	0.876
T265_00332	T265_04166	A0A075AJS4	A0A075AGX6	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.629
T265_00332	T265_04910	A0A075AJS4	A0A074ZY59	Uncharacterized protein.	Uncharacterized protein.	0.938
T265_00332	T265_07311	A0A075AJS4	A0A075AC10	Uncharacterized protein.	Uncharacterized protein.	0.997
T265_00332	T265_07584	A0A075AJS4	A0A074ZC17	Uncharacterized protein.	Uncharacterized protein.	0.488
T265_00332	T265_08277	A0A075AJS4	A0A074ZKU1	Uncharacterized protein.	Uncharacterized protein.	0.963
T265_00332	T265_08375	A0A075AJS4	A0A074Z9B8	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.994
T265_00332	T265_08482	A0A075AJS4	A0A074ZDM2	Uncharacterized protein.	Dor1-like family protein.	0.463