49 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10021	RBR-type E3 ubiquitin transferase. (530 aa)
	T265_06683	Uncharacterized protein. (146 aa)
	T265_06520	C3H1-type domain-containing protein. (253 aa)
	T265_06272	Uncharacterized protein. (145 aa)
	T265_13899	WD_REPEATS_REGION domain-containing protein. (751 aa)
	T265_05516	Uncharacterized protein. (223 aa)
	T265_13829	SCAPER_N domain-containing protein. (2080 aa)
	T265_14550	Fe2OG dioxygenase domain-containing protein. (392 aa)
	T265_05081	Uncharacterized protein. (104 aa)
	T265_06050	Uncharacterized protein. (499 aa)
	T265_14381	Uncharacterized protein. (1442 aa)
	T265_13355	Uncharacterized protein. (2224 aa)
	T265_02956	Uncharacterized protein. (116 aa)
	T265_05847	Uncharacterized protein. (118 aa)
	T265_13053	TPR_REGION domain-containing protein. (382 aa)
	T265_03195	Uncharacterized protein. (1573 aa)
	T265_02223	Tetraspanin. (225 aa)
	T265_12862	Uncharacterized protein. (1083 aa)
	T265_04969	Uncharacterized protein. (738 aa)
	T265_13100	Uncharacterized protein. (246 aa)
	T265_04867	Uncharacterized protein. (424 aa)
	T265_10860	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1980 aa)
	T265_01050	Uncharacterized protein. (989 aa)
	T265_00782	Reverse transcriptase domain-containing protein. (1583 aa)
	T265_01854	ANK_REP_REGION domain-containing protein. (1002 aa)
	T265_01723	Uncharacterized protein. (151 aa)
	T265_01776	Tyrosine-protein kinase. (1163 aa)
	T265_13359	Uncharacterized protein. (958 aa)
	T265_10074	F5/8 type C domain-containing protein. (1024 aa)
	T265_00809	Uncharacterized protein. (166 aa)
	T265_09152	Uncharacterized protein. (890 aa)
	T265_02528	RWD domain protein. (329 aa)
	T265_00138	Helicase ATP-binding domain-containing protein. (846 aa)
	T265_01224	Uncharacterized protein. (528 aa)
	T265_01171	Uncharacterized protein. (471 aa)
	T265_07298	Uncharacterized protein. (165 aa)
	T265_00403	Uncharacterized protein. (196 aa)
	T265_06944	Uncharacterized protein. (212 aa)
	T265_00379	Protein kinase domain-containing protein. (1054 aa)
	T265_06674	Uncharacterized protein. (106 aa)
	T265_13215	Uncharacterized protein. (84 aa)
	T265_00062	F5/8 type C domain-containing protein. (1288 aa)
	T265_08424	Uncharacterized protein. (1213 aa)
	T265_10641	Tetraspanin. (252 aa)
	T265_08908	Uncharacterized protein. (124 aa)
	T265_07945	Uncharacterized protein. (181 aa)
	T265_09902	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3314 aa)
	T265_08694	Plus3 domain-containing protein. (828 aa)
	T265_11719	Uncharacterized protein. (735 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00138	T265_14381	A0A075A7E3	A0A074ZMJ9	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.900
T265_00379	T265_09902	A0A075AD05	A0A074Z8G6	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.998
T265_01854	T265_13899	A0A075A1F2	A0A074ZHY5	ANK_REP_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.566
T265_04969	T265_13899	A0A074ZXT3	A0A074ZHY5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.566
T265_08424	T265_13899	A0A074ZDS0	A0A074ZHY5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.566
T265_08694	T265_13053	A0A074Z885	A0A074ZUN8	Plus3 domain-containing protein.	TPR_REGION domain-containing protein.	0.438
T265_09902	T265_00379	A0A074Z8G6	A0A075AD05	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Protein kinase domain-containing protein.	0.998
T265_13053	T265_08694	A0A074ZUN8	A0A074Z885	TPR_REGION domain-containing protein.	Plus3 domain-containing protein.	0.438
T265_13053	T265_13899	A0A074ZUN8	A0A074ZHY5	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.568
T265_13899	T265_01854	A0A074ZHY5	A0A075A1F2	WD_REPEATS_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.566
T265_13899	T265_04969	A0A074ZHY5	A0A074ZXT3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.566
T265_13899	T265_08424	A0A074ZHY5	A0A074ZDS0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.566
T265_13899	T265_13053	A0A074ZHY5	A0A074ZUN8	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.568
T265_14381	T265_00138	A0A074ZMJ9	A0A075A7E3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.900