STRINGSTRING
T265_16154 T265_16154 T265_12180 T265_12180 T265_07048 T265_07048 T265_06215 T265_06215 T265_13585 T265_13585 T265_04165 T265_04165
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T265_16154U-box domain-containing protein. (118 aa)
T265_12180Uncharacterized protein. (339 aa)
T265_07048Uncharacterized protein. (576 aa)
T265_06215RRM domain-containing protein. (197 aa)
T265_13585Uncharacterized protein. (496 aa)
T265_04165Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (215 aa)
Your Current Organism:
Opisthorchis viverrini
NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke
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