60 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15936	Uncharacterized protein. (76 aa)
	T265_12220	Uncharacterized protein. (161 aa)
	T265_15987	TMF_TATA_bd domain-containing protein. (103 aa)
	T265_15897	Uncharacterized protein. (72 aa)
	T265_10963	V-SNARE coiled-coil homology domain-containing protein. (1453 aa)
	T265_15672	Uncharacterized protein. (418 aa)
	T265_09997	Uncharacterized protein. (353 aa)
	T265_10935	Uncharacterized protein. (2749 aa)
	T265_08612	PDZ domain-containing protein. (376 aa)
	T265_11376	Uncharacterized protein. (592 aa)
	T265_08225	BZIP domain-containing protein. (216 aa)
	T265_11143	Uncharacterized protein. (1933 aa)
	T265_07776	Uncharacterized protein. (636 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_08468	Hrs_helical domain-containing protein. (486 aa)
	T265_09503	AAA domain-containing protein; Belongs to the AAA ATPase family. (398 aa)
	T265_09407	Uncharacterized protein. (1506 aa)
	T265_06148	Phosphoprotein 3. (284 aa)
	T265_14638	J domain-containing protein. (497 aa)
	T265_05750	TGF_BETA_2 domain-containing protein. (574 aa)
	T265_13754	Uncharacterized protein. (167 aa)
	T265_06492	G_PROTEIN_RECEP_F1_2 domain-containing protein. (450 aa)
	T265_05114	C2 domain-containing protein. (366 aa)
	T265_05333	Ras family protein. (227 aa)
	T265_04860	Uncharacterized protein. (278 aa)
	T265_13647	Fmp27_GFWDK domain-containing protein. (2366 aa)
	T265_07810	Uncharacterized protein. (583 aa)
	T265_13554	Uncharacterized protein. (100 aa)
	T265_07457	Uncharacterized protein. (286 aa)
	T265_04423	Uncharacterized protein. (942 aa)
	T265_04210	C2 domain-containing protein. (396 aa)
	T265_05210	Uncharacterized protein. (1956 aa)
	T265_04939	Ion_trans domain-containing protein. (778 aa)
	T265_13618	FYVE_2 domain-containing protein. (264 aa)
	T265_06795	Uncharacterized protein. (99 aa)
	T265_14039	tRNA-binding domain-containing protein. (306 aa)
	T265_03110	SB domain-containing protein. (578 aa)
	T265_05947	Deacetylase sirtuin-type domain-containing protein. (510 aa)
	T265_05447	Uncharacterized protein. (542 aa)
	T265_05385	Uncharacterized protein. (1255 aa)
	T265_12924	Uncharacterized protein. (214 aa)
	T265_01199	ACAS_N domain-containing protein. (381 aa)
	T265_12948	Uncharacterized protein. (256 aa)
	T265_15248	Ig-like domain-containing protein. (513 aa)
	T265_02233	LLGL domain-containing protein. (1387 aa)
	T265_04273	Uncharacterized protein. (2443 aa)
	T265_01723	Uncharacterized protein. (151 aa)
	T265_12743	Uncharacterized protein. (308 aa)
	T265_09502	AAA domain-containing protein. (274 aa)
	T265_00309	Uncharacterized protein. (259 aa)
	T265_12475	PX domain-containing protein. (403 aa)
	T265_14594	Uncharacterized protein. (128 aa)
	T265_01677	Uncharacterized protein. (223 aa)
	T265_07605	Uncharacterized protein. (1839 aa)
	T265_14272	Uncharacterized protein. (332 aa)
	T265_07174	Uncharacterized protein. (483 aa)
	T265_14092	Uncharacterized protein. (218 aa)
	T265_00020	Uncharacterized protein. (357 aa)
	T265_13387	Uncharacterized protein. (401 aa)
	T265_03745	Uncharacterized protein. (944 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00020	T265_01677	A0A075ADF1	A0A075A948	Uncharacterized protein.	Uncharacterized protein.	0.412
T265_00020	T265_10963	A0A075ADF1	A0A074Z0L0	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.480
T265_00309	T265_07605	A0A075A694	A0A075AB40	Uncharacterized protein.	Uncharacterized protein.	0.464
T265_01199	T265_12743	A0A074ZZ47	A0A075A396	ACAS_N domain-containing protein.	Uncharacterized protein.	0.632
T265_01677	T265_00020	A0A075A948	A0A075ADF1	Uncharacterized protein.	Uncharacterized protein.	0.412
T265_01677	T265_01723	A0A075A948	A0A075A1H2	Uncharacterized protein.	Uncharacterized protein.	0.685
T265_01677	T265_04210	A0A075A948	A0A074ZPW2	Uncharacterized protein.	C2 domain-containing protein.	0.547
T265_01677	T265_04860	A0A075A948	A0A074ZLN0	Uncharacterized protein.	Uncharacterized protein.	0.735
T265_01677	T265_05114	A0A075A948	A0A074ZKP7	Uncharacterized protein.	C2 domain-containing protein.	0.867
T265_01677	T265_07810	A0A075A948	A0A074ZMF2	Uncharacterized protein.	Uncharacterized protein.	0.867
T265_01677	T265_09997	A0A075A948	A0A074Z3Y4	Uncharacterized protein.	Uncharacterized protein.	0.412
T265_01677	T265_13618	A0A075A948	A0A074ZR18	Uncharacterized protein.	FYVE_2 domain-containing protein.	0.735
T265_01723	T265_01677	A0A075A1H2	A0A075A948	Uncharacterized protein.	Uncharacterized protein.	0.685
T265_01723	T265_05114	A0A075A1H2	A0A074ZKP7	Uncharacterized protein.	C2 domain-containing protein.	0.604
T265_01723	T265_07810	A0A075A1H2	A0A074ZMF2	Uncharacterized protein.	Uncharacterized protein.	0.604
T265_03110	T265_06795	A0A074ZTQ1	A0A074ZR51	SB domain-containing protein.	Uncharacterized protein.	0.440
T265_03110	T265_07605	A0A074ZTQ1	A0A075AB40	SB domain-containing protein.	Uncharacterized protein.	0.771
T265_03110	T265_08468	A0A074ZTQ1	A0A074ZDL0	SB domain-containing protein.	Hrs_helical domain-containing protein.	0.961
T265_03110	T265_09502	A0A074ZTQ1	A0A075A4P2	SB domain-containing protein.	AAA domain-containing protein.	0.612
T265_03110	T265_09503	A0A074ZTQ1	A0A074ZGK8	SB domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.612