79 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_09502	AAA domain-containing protein. (274 aa)
	T265_00079	SAM domain-containing protein. (753 aa)
	T265_12743	Uncharacterized protein. (308 aa)
	T265_01329	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (658 aa)
	T265_15032	Uncharacterized protein. (790 aa)
	T265_15248	Ig-like domain-containing protein. (513 aa)
	T265_12948	Uncharacterized protein. (256 aa)
	T265_01438	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (645 aa)
	T265_10860	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1980 aa)
	T265_01199	ACAS_N domain-containing protein. (381 aa)
	T265_04867	Uncharacterized protein. (424 aa)
	T265_02940	PH domain-containing protein. (597 aa)
	T265_05234	Protein kinase domain-containing protein. (637 aa)
	T265_02588	TPR_MLP1_2 domain-containing protein. (2563 aa)
	T265_02549	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (199 aa)
	T265_13320	Uncharacterized protein. (202 aa)
	T265_13064	PRELI/MSF1 domain-containing protein. (172 aa)
	T265_13334	Uncharacterized protein. (687 aa)
	T265_05958	AN1-type domain-containing protein. (244 aa)
	T265_15936	Uncharacterized protein. (76 aa)
	T265_03110	SB domain-containing protein. (578 aa)
	T265_14039	tRNA-binding domain-containing protein. (306 aa)
	T265_03438	Uncharacterized protein. (121 aa)
	T265_06795	Uncharacterized protein. (99 aa)
	T265_05210	Uncharacterized protein. (1956 aa)
	T265_04138	PACT_coil_coil domain-containing protein. (3129 aa)
	T265_04201	Uncharacterized protein. (1022 aa)
	T265_04423	Uncharacterized protein. (942 aa)
	T265_13554	Uncharacterized protein. (100 aa)
	T265_07810	Uncharacterized protein. (583 aa)
	T265_13647	Fmp27_GFWDK domain-containing protein. (2366 aa)
	T265_05333	Ras family protein. (227 aa)
	T265_05114	C2 domain-containing protein. (366 aa)
	T265_06492	G_PROTEIN_RECEP_F1_2 domain-containing protein. (450 aa)
	T265_13754	Uncharacterized protein. (167 aa)
	T265_05531	Uncharacterized protein. (1855 aa)
	T265_07025	Uncharacterized protein. (96 aa)
	T265_14779	Uncharacterized protein. (138 aa)
	T265_09316	Uncharacterized protein. (498 aa)
	T265_06148	Phosphoprotein 3. (284 aa)
	T265_09503	AAA domain-containing protein; Belongs to the AAA ATPase family. (398 aa)
	T265_08091	Uncharacterized protein. (206 aa)
	T265_08176	Uncharacterized protein. (323 aa)
	T265_14191	Uncharacterized protein. (294 aa)
	T265_08468	Hrs_helical domain-containing protein. (486 aa)
	T265_08778	BTB domain-containing protein. (462 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_11143	Uncharacterized protein. (1933 aa)
	T265_14531	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (336 aa)
	T265_08225	BZIP domain-containing protein. (216 aa)
	T265_11376	Uncharacterized protein. (592 aa)
	T265_14606	Protein kinase domain-containing protein. (2826 aa)
	T265_15030	Uncharacterized protein. (691 aa)
	T265_14669	Uncharacterized protein. (1023 aa)
	T265_09171	Uncharacterized protein. (974 aa)
	T265_10935	Uncharacterized protein. (2749 aa)
	T265_10297	Uncharacterized protein. (916 aa)
	T265_10639	Uncharacterized protein. (145 aa)
	T265_15214	BAG domain-containing protein. (403 aa)
	T265_15672	Uncharacterized protein. (418 aa)
	T265_11055	Uncharacterized protein. (188 aa)
	T265_15897	Uncharacterized protein. (72 aa)
	T265_15987	TMF_TATA_bd domain-containing protein. (103 aa)
	T265_12220	Uncharacterized protein. (161 aa)
	T265_16072	Uncharacterized protein. (70 aa)
	T265_09169	C2 domain protein. (75 aa)
	T265_02536	Uncharacterized protein. (637 aa)
	T265_12475	PX domain-containing protein. (403 aa)
	T265_14594	Uncharacterized protein. (128 aa)
	T265_07605	Uncharacterized protein. (1839 aa)
	T265_07174	Uncharacterized protein. (483 aa)
	T265_05289	Uncharacterized protein. (913 aa)
	T265_04465	FCP1 homology domain-containing protein. (493 aa)
	T265_13387	Uncharacterized protein. (401 aa)
	T265_03772	Uncharacterized protein. (2837 aa)
	T265_13321	Uncharacterized protein. (751 aa)
	T265_03745	Uncharacterized protein. (944 aa)
	T265_12873	Uncharacterized protein. (361 aa)
	T265_00386	Uncharacterized protein. (560 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01199	T265_12743	A0A074ZZ47	A0A075A396	ACAS_N domain-containing protein.	Uncharacterized protein.	0.632
T265_01329	T265_01438	A0A075A331	A0A074ZZR0	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.908
T265_01329	T265_08225	A0A075A331	A0A074Z9V0	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	BZIP domain-containing protein.	0.634
T265_01438	T265_01329	A0A074ZZR0	A0A075A331	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.908
T265_01438	T265_08225	A0A074ZZR0	A0A074Z9V0	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	BZIP domain-containing protein.	0.681
T265_02940	T265_06795	A0A074ZXP4	A0A074ZR51	PH domain-containing protein.	Uncharacterized protein.	0.679
T265_02940	T265_08778	A0A074ZXP4	A0A074ZCG5	PH domain-containing protein.	BTB domain-containing protein.	0.729
T265_02940	T265_12873	A0A074ZXP4	A0A075AIQ1	PH domain-containing protein.	Uncharacterized protein.	0.772
T265_02940	T265_14669	A0A074ZXP4	A0A074Z7W2	PH domain-containing protein.	Uncharacterized protein.	0.729
T265_03110	T265_06795	A0A074ZTQ1	A0A074ZR51	SB domain-containing protein.	Uncharacterized protein.	0.440
T265_03110	T265_07605	A0A074ZTQ1	A0A075AB40	SB domain-containing protein.	Uncharacterized protein.	0.771
T265_03110	T265_08468	A0A074ZTQ1	A0A074ZDL0	SB domain-containing protein.	Hrs_helical domain-containing protein.	0.961
T265_03110	T265_09502	A0A074ZTQ1	A0A075A4P2	SB domain-containing protein.	AAA domain-containing protein.	0.612
T265_03110	T265_09503	A0A074ZTQ1	A0A074ZGK8	SB domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.612
T265_03110	T265_12220	A0A074ZTQ1	A0A074YV12	SB domain-containing protein.	Uncharacterized protein.	0.961
T265_03438	T265_04201	A0A074ZRL8	A0A074ZNZ7	Uncharacterized protein.	Uncharacterized protein.	0.467
T265_03745	T265_08176	A0A075AHE2	A0A074ZEJ4	Uncharacterized protein.	Uncharacterized protein.	0.879
T265_03772	T265_04201	A0A075AHC9	A0A074ZNZ7	Uncharacterized protein.	Uncharacterized protein.	0.467
T265_03772	T265_13321	A0A075AHC9	A0A075AHD0	Uncharacterized protein.	Uncharacterized protein.	0.426
T265_04201	T265_03438	A0A074ZNZ7	A0A074ZRL8	Uncharacterized protein.	Uncharacterized protein.	0.467