(54 nodes) Positive regulation of DNA metabolic process network (Opisthorchis viverrini)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10531	DHHA2 domain-containing protein; Belongs to the complex I LYR family. (918 aa)
	T265_10398	Uncharacterized protein. (2023 aa)
	T265_11437	DUF4550 domain-containing protein. (878 aa)
	T265_15060	FHA domain-containing protein. (690 aa)
	T265_10444	CDT1 domain-containing protein. (680 aa)
	T265_14653	Uncharacterized protein. (220 aa)
	T265_14655	Uncharacterized protein. (532 aa)
	T265_08481	Uncharacterized protein. (654 aa)
	T265_08999	Poly [ADP-ribose] polymerase. (1742 aa)
	T265_14343	AAA domain-containing protein. (913 aa)
	T265_08733	Uncharacterized protein. (161 aa)
	T265_08284	PHB domain-containing protein. (243 aa)
	T265_06656	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (553 aa)
	T265_06520	C3H1-type domain-containing protein. (253 aa)
	T265_08666	Uncharacterized protein. (179 aa)
	T265_14026	Uncharacterized protein. (228 aa)
	T265_13978	Uncharacterized protein. (2777 aa)
	T265_04851	Uncharacterized protein. (367 aa)
	T265_14381	Uncharacterized protein. (1442 aa)
	T265_13355	Uncharacterized protein. (2224 aa)
	T265_06655	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (239 aa)
	T265_04662	Sulfhydryl oxidase. (464 aa)
	T265_06408	Uncharacterized protein. (245 aa)
	T265_03453	Poly [ADP-ribose] polymerase. (402 aa)
	T265_02963	Uncharacterized protein. (856 aa)
	T265_03021	Uncharacterized protein. (453 aa)
	T265_02401	Protein kinase domain-containing protein. (2254 aa)
	T265_02103	PI3K/PI4K domain-containing protein. (4230 aa)
	T265_01948	MMS19_N domain-containing protein. (527 aa)
	T265_03195	Uncharacterized protein. (1573 aa)
	T265_13665	Uncharacterized protein. (2634 aa)
	T265_01293	Enhancer of polycomb-like protein. (706 aa)
	T265_01915	Uncharacterized protein. (709 aa)
	T265_13276	Uncharacterized protein. (1630 aa)
	T265_12528	Uncharacterized protein. (1533 aa)
	T265_01035	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (365 aa)
	T265_00138	Helicase ATP-binding domain-containing protein. (846 aa)
	T265_01949	MMS19_C domain-containing protein. (749 aa)
	T265_01862	DUF3504 domain-containing protein. (902 aa)
	T265_01429	AAA domain-containing protein. (1033 aa)
	T265_07141	DBF4-type domain-containing protein. (1194 aa)
	T265_06410	53-BP1_Tudor domain-containing protein. (948 aa)
	T265_05703	NFRKB_winged domain-containing protein. (544 aa)
	T265_04795	Protein kinase domain-containing protein. (527 aa)
	T265_04495	Ku domain-containing protein. (974 aa)
	T265_02658	Uncharacterized protein. (78 aa)
	T265_02505	Uncharacterized protein. (364 aa)
	T265_01697	Cytochrome c domain-containing protein. (264 aa)
	T265_16192	Uncharacterized protein. (60 aa)
	T265_15623	Telo_bind domain-containing protein. (725 aa)
	T265_15946	BRCT domain-containing protein. (135 aa)
	T265_15873	Telo_bind domain-containing protein. (110 aa)
	T265_10980	Uncharacterized protein. (1014 aa)
	T265_10618	CT20 family protein. (168 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00138	T265_01035	A0A075A7E3	A0A075A3T3	Helicase ATP-binding domain-containing protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.746
T265_00138	T265_01429	A0A075A7E3	A0A075A9X2	Helicase ATP-binding domain-containing protein.	AAA domain-containing protein.	0.507
T265_00138	T265_01915	A0A075A7E3	A0A075A157	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.465
T265_00138	T265_01948	A0A075A7E3	A0A074ZWM0	Helicase ATP-binding domain-containing protein.	MMS19_N domain-containing protein.	0.923
T265_00138	T265_01949	A0A075A7E3	A0A075A833	Helicase ATP-binding domain-containing protein.	MMS19_C domain-containing protein.	0.923
T265_00138	T265_03453	A0A075A7E3	A0A074ZSJ5	Helicase ATP-binding domain-containing protein.	Poly [ADP-ribose] polymerase.	0.483
T265_00138	T265_04495	A0A075A7E3	A0A075AGG9	Helicase ATP-binding domain-containing protein.	Ku domain-containing protein.	0.517
T265_00138	T265_04851	A0A075A7E3	A0A074ZLM1	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.474
T265_00138	T265_08481	A0A075A7E3	A0A074Z937	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.818
T265_00138	T265_10980	A0A075A7E3	A0A074Z0K1	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.821
T265_00138	T265_12528	A0A075A7E3	A0A075A3L2	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.742
T265_00138	T265_14343	A0A075A7E3	A0A074ZC76	Helicase ATP-binding domain-containing protein.	AAA domain-containing protein.	0.560
T265_00138	T265_14381	A0A075A7E3	A0A074ZMJ9	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.900
T265_01035	T265_00138	A0A075A3T3	A0A075A7E3	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Helicase ATP-binding domain-containing protein.	0.746
T265_01035	T265_01429	A0A075A3T3	A0A075A9X2	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	AAA domain-containing protein.	0.879
T265_01035	T265_02103	A0A075A3T3	A0A074ZWB6	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	PI3K/PI4K domain-containing protein.	0.455
T265_01035	T265_04495	A0A075A3T3	A0A075AGG9	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Ku domain-containing protein.	0.683
T265_01035	T265_04851	A0A075A3T3	A0A074ZLM1	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.816
T265_01035	T265_06408	A0A075A3T3	A0A074ZSE8	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.420
T265_01035	T265_06410	A0A075A3T3	A0A075ADU6	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	53-BP1_Tudor domain-containing protein.	0.497