87 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_09249	WW domain-containing protein. (469 aa)
	T265_11784	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1055 aa)
	T265_03341	Uncharacterized protein. (594 aa)
	T265_02025	WD_REPEATS_REGION domain-containing protein. (1238 aa)
	T265_02911	Protein kinase domain-containing protein. (624 aa)
	T265_02940	PH domain-containing protein. (597 aa)
	T265_12800	Uncharacterized protein. (986 aa)
	T265_10860	FZ domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1980 aa)
	T265_13465	Uncharacterized protein. (122 aa)
	T265_12708	Uncharacterized protein. (648 aa)
	T265_13402	Uncharacterized protein. (3209 aa)
	T265_13369	Uncharacterized protein. (429 aa)
	T265_03736	Uncharacterized protein. (361 aa)
	T265_00265	Reverse transcriptase domain-containing protein. (937 aa)
	T265_13256	Uncharacterized protein. (560 aa)
	T265_00054	Uncharacterized protein. (659 aa)
	T265_01003	DUF667 domain-containing protein. (193 aa)
	T265_13048	Uncharacterized protein. (182 aa)
	T265_12515	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1004 aa)
	T265_12475	PX domain-containing protein. (403 aa)
	T265_08738	DUF667 domain-containing protein. (195 aa)
	T265_08495	SET domain-containing protein. (416 aa)
	T265_14506	HMG box domain-containing protein. (159 aa)
	T265_01393	FERM central domain protein. (863 aa)
	T265_01429	AAA domain-containing protein. (1033 aa)
	T265_01290	PID domain-containing protein. (759 aa)
	T265_00770	Homeobox domain-containing protein. (816 aa)
	T265_12512	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (656 aa)
	T265_14164	Rho-GAP domain-containing protein. (787 aa)
	T265_00071	DNA-binding protein SATB. (1410 aa)
	T265_06410	53-BP1_Tudor domain-containing protein. (948 aa)
	T265_04979	Uncharacterized protein. (359 aa)
	T265_04495	Ku domain-containing protein. (974 aa)
	T265_04369	Uncharacterized protein. (785 aa)
	T265_13387	Uncharacterized protein. (401 aa)
	T265_03200	DAGKc domain-containing protein. (542 aa)
	T265_16026	Uncharacterized protein. (101 aa)
	T265_15987	TMF_TATA_bd domain-containing protein. (103 aa)
	T265_15709	Ig-like domain-containing protein. (359 aa)
	T265_11719	Uncharacterized protein. (735 aa)
	T265_11303	Reverse transcriptase domain-containing protein. (919 aa)
	T265_15946	BRCT domain-containing protein. (135 aa)
	T265_15835	Uncharacterized protein. (460 aa)
	T265_11735	Stork_head domain-containing protein. (632 aa)
	T265_10496	Tyrosine-protein kinase. (1085 aa)
	T265_10935	Uncharacterized protein. (2749 aa)
	T265_09717	Uncharacterized protein. (1110 aa)
	T265_09662	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (502 aa)
	T265_10768	Uncharacterized protein. (3047 aa)
	T265_15899	Uncharacterized protein. (121 aa)
	T265_09902	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3314 aa)
	T265_08220	Uncharacterized protein. (113 aa)
	T265_08225	BZIP domain-containing protein. (216 aa)
	T265_08108	Uncharacterized protein. (576 aa)
	T265_11013	Mothers against decapentaplegic homolog. (790 aa)
	T265_09183	RING-type domain-containing protein. (629 aa)
	T265_07647	Sema domain-containing protein. (2788 aa)
	T265_15249	Uncharacterized protein. (727 aa)
	T265_14358	Uncharacterized protein. (148 aa)
	T265_07622	P53 domain-containing protein. (917 aa)
	T265_07579	Uncharacterized protein. (442 aa)
	T265_08284	PHB domain-containing protein. (243 aa)
	T265_06896	Uncharacterized protein. (582 aa)
	T265_06840	Uncharacterized protein. (211 aa)
	T265_08666	Uncharacterized protein. (179 aa)
	T265_05750	TGF_BETA_2 domain-containing protein. (574 aa)
	T265_05641	Uncharacterized protein. (141 aa)
	T265_06596	Uncharacterized protein. (1332 aa)
	T265_06492	G_PROTEIN_RECEP_F1_2 domain-containing protein. (450 aa)
	T265_14026	Uncharacterized protein. (228 aa)
	T265_14507	Uncharacterized protein. (489 aa)
	T265_13650	Uncharacterized protein. (299 aa)
	T265_13953	ANK_REP_REGION domain-containing protein. (404 aa)
	T265_04178	Uncharacterized protein. (703 aa)
	T265_04423	Uncharacterized protein. (942 aa)
	T265_04286	Uncharacterized protein. (1013 aa)
	T265_04973	WD_REPEATS_REGION domain-containing protein. (315 aa)
	T265_13637	DUF667 domain-containing protein. (193 aa)
	T265_06717	Kinase domain protein; Belongs to the protein kinase superfamily. (497 aa)
	T265_03446	AGC-kinase C-terminal domain-containing protein. (80 aa)
	T265_06354	Uncharacterized protein. (1649 aa)
	T265_13483	IRF tryptophan pentad repeat domain-containing protein. (657 aa)
	T265_03229	Uncharacterized protein. (970 aa)
	T265_02910	Protein kinase domain-containing protein. (429 aa)
	T265_03021	Uncharacterized protein. (453 aa)
	T265_13104	Uncharacterized protein. (819 aa)
	T265_02579	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (619 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00054	T265_11013	A0A075A3F6	A0A074ZB42	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.430
T265_01290	T265_03446	A0A075AA17	A0A074ZSI1	PID domain-containing protein.	AGC-kinase C-terminal domain-containing protein.	0.740
T265_01290	T265_06596	A0A075AA17	A0A074ZK15	PID domain-containing protein.	Uncharacterized protein.	0.449
T265_01290	T265_13256	A0A075AA17	A0A075A3D9	PID domain-containing protein.	Uncharacterized protein.	0.740
T265_02579	T265_05750	A0A074ZUK3	A0A074ZJG9	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	TGF_BETA_2 domain-containing protein.	0.774
T265_02579	T265_06717	A0A074ZUK3	A0A074ZRD6	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Kinase domain protein; Belongs to the protein kinase superfamily.	0.435
T265_02579	T265_11013	A0A074ZUK3	A0A074ZB42	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.691
T265_02579	T265_12512	A0A074ZUK3	A0A075ACV8	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.905
T265_02910	T265_02911	A0A074ZTD3	A0A074ZXM0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.900
T265_02910	T265_15249	A0A074ZTD3	A0A074ZC05	Protein kinase domain-containing protein.	Uncharacterized protein.	0.468
T265_02910	T265_15899	A0A074ZTD3	A0A074Z625	Protein kinase domain-containing protein.	Uncharacterized protein.	0.468
T265_02911	T265_02910	A0A074ZXM0	A0A074ZTD3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.900
T265_02911	T265_15249	A0A074ZXM0	A0A074ZC05	Protein kinase domain-containing protein.	Uncharacterized protein.	0.468
T265_02911	T265_15899	A0A074ZXM0	A0A074Z625	Protein kinase domain-containing protein.	Uncharacterized protein.	0.468
T265_02940	T265_06717	A0A074ZXP4	A0A074ZRD6	PH domain-containing protein.	Kinase domain protein; Belongs to the protein kinase superfamily.	0.513
T265_03200	T265_03446	A0A075AHR9	A0A074ZSI1	DAGKc domain-containing protein.	AGC-kinase C-terminal domain-containing protein.	0.547
T265_03200	T265_13256	A0A075AHR9	A0A075A3D9	DAGKc domain-containing protein.	Uncharacterized protein.	0.547
T265_03341	T265_06596	A0A074ZWE0	A0A074ZK15	Uncharacterized protein.	Uncharacterized protein.	0.430
T265_03446	T265_01290	A0A074ZSI1	A0A075AA17	AGC-kinase C-terminal domain-containing protein.	PID domain-containing protein.	0.740
T265_03446	T265_03200	A0A074ZSI1	A0A075AHR9	AGC-kinase C-terminal domain-containing protein.	DAGKc domain-containing protein.	0.547