94 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_03846	Uncharacterized protein. (784 aa)
	T265_02888	RING-type domain-containing protein. (1306 aa)
	T265_13146	Uncharacterized protein. (455 aa)
	T265_02799	Uncharacterized protein. (4003 aa)
	T265_06111	RBR-type E3 ubiquitin transferase. (447 aa)
	T265_09344	RING-type domain-containing protein. (379 aa)
	T265_14775	RWD domain-containing protein. (146 aa)
	T265_09141	E3 ubiquitin-protein ligase. (819 aa)
	T265_13946	CLTH domain-containing protein. (505 aa)
	T265_06084	Uncharacterized protein. (404 aa)
	T265_08760	Uncharacterized protein. (1192 aa)
	T265_05172	HECT domain-containing protein. (1156 aa)
	T265_13683	Uncharacterized protein. (553 aa)
	T265_07149	Uncharacterized protein. (1229 aa)
	T265_03587	Uncharacterized protein. (672 aa)
	T265_16154	U-box domain-containing protein. (118 aa)
	T265_00074	WWE domain-containing protein. (304 aa)
	T265_03240	RING-type domain-containing protein. (311 aa)
	T265_03301	Uncharacterized protein. (1317 aa)
	T265_10724	Reverse transcriptase domain-containing protein. (917 aa)
	T265_09490	Uncharacterized protein. (972 aa)
	T265_09479	TRAF-type domain-containing protein. (409 aa)
	T265_15867	Uncharacterized protein. (123 aa)
	T265_09230	HECT domain-containing protein. (1377 aa)
	T265_14772	RING-type domain-containing protein. (2249 aa)
	T265_09797	U-box domain-containing protein. (151 aa)
	T265_08451	Uncharacterized protein. (100 aa)
	T265_14562	RING-type domain-containing protein. (518 aa)
	T265_08213	RING-type domain-containing protein. (669 aa)
	T265_09183	RING-type domain-containing protein. (629 aa)
	T265_07774	Uncharacterized protein. (1466 aa)
	T265_10909	UBIQUITIN_CONJUGAT_2 domain-containing protein. (1138 aa)
	T265_10913	Uncharacterized protein. (137 aa)
	T265_14331	Uncharacterized protein. (3633 aa)
	T265_07432	RING-type domain-containing protein. (619 aa)
	T265_07150	Uncharacterized protein. (100 aa)
	T265_07048	Uncharacterized protein. (576 aa)
	T265_07002	U-box domain-containing protein. (340 aa)
	T265_10021	RBR-type E3 ubiquitin transferase. (530 aa)
	T265_07539	Zinc finger, C3HC4 type. (734 aa)
	T265_09729	UBR-type domain-containing protein. (432 aa)
	T265_09798	RING-type domain-containing protein. (1318 aa)
	T265_14958	TPR_REGION domain-containing protein. (294 aa)
	T265_11222	RBR-type E3 ubiquitin transferase. (511 aa)
	T265_10568	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2344 aa)
	T265_10644	RING-type domain-containing protein. (812 aa)
	T265_11953	NHR domain-containing protein. (443 aa)
	T265_11271	RING-type domain-containing protein. (258 aa)
	T265_15500	Uncharacterized protein. (702 aa)
	T265_11750	Uncharacterized protein. (1518 aa)
	T265_11722	Uncharacterized protein. (204 aa)
	T265_11843	RING-type domain-containing protein. (788 aa)
	T265_11921	U-box domain-containing protein. (1154 aa)
	T265_15920	Lon N-terminal domain-containing protein. (49 aa)
	T265_16156	Uncharacterized protein. (106 aa)
	T265_09579	UBR-type domain-containing protein. (8268 aa)
	T265_12529	Uncharacterized protein. (1937 aa)
	T265_15032	Uncharacterized protein. (790 aa)
	T265_03542	U-box domain-containing protein. (1157 aa)
	T265_13254	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2824 aa)
	T265_00054	Uncharacterized protein. (659 aa)
	T265_12616	CTLH domain-containing protein. (475 aa)
	T265_00626	Zf-rbx1 domain-containing protein. (332 aa)
	T265_09152	Uncharacterized protein. (890 aa)
	T265_12502	Uncharacterized protein. (600 aa)
	T265_00286	Zinc finger, C3HC4 type. (560 aa)
	T265_00010	HECT domain-containing protein. (1130 aa)
	T265_01385	Uncharacterized protein. (4665 aa)
	T265_14454	HECT domain-containing protein. (1113 aa)
	T265_00866	Uncharacterized protein. (528 aa)
	T265_00462	RING-type domain-containing protein. (473 aa)
	T265_05436	RING-type domain-containing protein. (694 aa)
	T265_03986	Uncharacterized protein. (280 aa)
	T265_02589	SNF2_N domain-containing protein. (522 aa)
	T265_12754	RING-type domain-containing protein. (244 aa)
	T265_00947	Uncharacterized protein. (1046 aa)
	T265_12587	Zinc finger, C3HC4 type. (210 aa)
	T265_00355	RING-type domain-containing protein. (232 aa)
	T265_00552	Uncharacterized protein. (920 aa)
	T265_10467	RING-CH-type domain-containing protein. (1115 aa)
	T265_10549	HECT domain-containing protein. (3250 aa)
	T265_02196	Uncharacterized protein. (505 aa)
	T265_12753	Uncharacterized protein. (211 aa)
	T265_13011	Uncharacterized protein. (652 aa)
	T265_01325	RING-type domain-containing protein. (356 aa)
	T265_02572	DC-STAMP-like protein; Belongs to the tetraspanin (TM4SF) family. (1349 aa)
	T265_01440	RBR-type E3 ubiquitin transferase. (369 aa)
	T265_01606	RBR-type E3 ubiquitin transferase. (769 aa)
	T265_13082	HECT domain-containing protein. (1676 aa)
	T265_12924	Uncharacterized protein. (214 aa)
	T265_03111	Uncharacterized protein. (510 aa)
	T265_11781	RING-type domain-containing protein. (194 aa)
	T265_05447	Uncharacterized protein. (542 aa)
	T265_02591	RING-type domain-containing protein. (1300 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00010	T265_10549	A0A075A6X4	A0A075A0T8	HECT domain-containing protein.	HECT domain-containing protein.	0.782
T265_00054	T265_10549	A0A075A3F6	A0A075A0T8	Uncharacterized protein.	HECT domain-containing protein.	0.408
T265_00054	T265_15032	A0A075A3F6	A0A075A2U8	Uncharacterized protein.	Uncharacterized protein.	0.424
T265_00074	T265_10549	A0A075AJY9	A0A075A0T8	WWE domain-containing protein.	HECT domain-containing protein.	0.703
T265_00286	T265_10467	A0A075A672	A0A075A167	Zinc finger, C3HC4 type.	RING-CH-type domain-containing protein.	0.592
T265_00286	T265_10644	A0A075A672	A0A074Z1G5	Zinc finger, C3HC4 type.	RING-type domain-containing protein.	0.900
T265_00286	T265_13254	A0A075A672	A0A075A3D0	Zinc finger, C3HC4 type.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.474
T265_00355	T265_10549	A0A075AJT0	A0A075A0T8	RING-type domain-containing protein.	HECT domain-containing protein.	0.555
T265_00355	T265_14772	A0A075AJT0	A0A074Z6X1	RING-type domain-containing protein.	RING-type domain-containing protein.	0.542
T265_00626	T265_01440	A0A075A5D8	A0A074ZYM8	Zf-rbx1 domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.857
T265_00626	T265_01606	A0A075A5D8	A0A074ZY52	Zf-rbx1 domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.585
T265_00626	T265_02888	A0A075A5D8	A0A074ZUF6	Zf-rbx1 domain-containing protein.	RING-type domain-containing protein.	0.472
T265_00626	T265_10909	A0A075A5D8	A0A074ZBG0	Zf-rbx1 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.538
T265_00626	T265_11222	A0A075A5D8	A0A074Z3V0	Zf-rbx1 domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.585
T265_00626	T265_11953	A0A075A5D8	A0A074Z150	Zf-rbx1 domain-containing protein.	NHR domain-containing protein.	0.438
T265_00626	T265_15032	A0A075A5D8	A0A075A2U8	Zf-rbx1 domain-containing protein.	Uncharacterized protein.	0.911
T265_00947	T265_08760	A0A075AJA4	A0A074ZJ26	Uncharacterized protein.	Uncharacterized protein.	0.922
T265_00947	T265_09141	A0A075AJA4	A0A074ZHW0	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.908
T265_00947	T265_10549	A0A075AJA4	A0A075A0T8	Uncharacterized protein.	HECT domain-containing protein.	0.460
T265_00947	T265_11781	A0A075AJA4	A0A074ZW71	Uncharacterized protein.	RING-type domain-containing protein.	0.430